Data DOI: 10.15785/SBGRID/385 | ID: 385
Publication DOI: 10.1074/jbc.M116.725432
5IAV Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Dey Laboratory, University of Iowa
Release Date: Nov. 11, 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/385
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/385 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/385 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/385 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/385 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 385 ; shasum -c files.sha'
Storage requirements: 6.4G
Biological Sample:
Bacillus anthracis Prolyl 4-hydroxylase in complex with Co(II) and malonate
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
19-ID, SBC-CAT, APS
Data Creation Date:
Nov. 16, 2014
Related Datasets:
None
Schnicker, NJ; Dey, M. 2016. "X-Ray Diffraction data for: Bacillus anthracis Prolyl 4-hydroxylase in complex with Co(II) and malonate. PDB Code 5IAV", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/385.
Native dataset, Co(II) bound and malonate
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Nicholas J Schnicker | Data Collector, Depositor | University of Iowa |
| Mishtu Dey | , PI | University of Iowa |
Processed with XDS
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97907
Sweep:
SWEEP1
Files:
/programs/datagrid/385/n5_5.####.img
Images:
1 - 360
Beam:
(154.5, 159.98) -> (154.5, 162.25)
Distance:
181.7 -> 181.75
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.45 | 3.93 | 1.45 |
| Low resolution limit | 28.11 | 28.12 | 1.48 |
| Completeness | 99.6 | 97.7 | 99.9 |
| Multiplicity | 3.6 | 3.5 | 3.7 |
| I/sigma | 15.5 | 42.4 | 1.2 |
| Rmerge | 0.029 | 0.02 | 0.95 |
| CC half | 0.999 | 0.998 | 0.462 |
| Anomalous completeness | 96.5 | 90.6 | 99.0 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 42.79 | 41.52 | 111.11 | 90.0 | 96.67 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97907
Sweep:
SWEEP1
Files:
/programs/datagrid/385/n5_5.####.img
Images:
1 - 360
Beam:
(154.5, 159.98) -> (154.5, 162.26)
Distance:
181.7 -> 181.92
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.46 | 3.96 | 1.46 |
| Low resolution limit | 41.3 | 41.32 | 1.49 |
| Completeness | 99.5 | 97.4 | 99.8 |
| Multiplicity | 3.6 | 3.5 | 3.7 |
| I/sigma | 15.8 | 42.3 | 1.2 |
| Rmerge | 0.029 | 0.02 | 0.893 |
| CC half | 0.999 | 0.998 | 0.509 |
| Anomalous completeness | 96.4 | 90.2 | 99.2 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 42.79 | 41.52 | 111.11 | 90.0 | 96.67 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97907
Sweep:
SWEEP1
Files:
/programs/datagrid/385/n5_5.####.img
Images:
1 - 360
Beam:
(154.5, 159.98) -> (154.5, 162.26)
Distance:
181.7 -> 181.89
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.51 | 4.1 | 1.51 |
| Low resolution limit | 55.16 | 55.2 | 1.54 |
| Completeness | 97.6 | 100.0 | 82.2 |
| Multiplicity | 3.2 | 3.6 | 1.8 |
| I/sigma | 10.6 | 21.5 | 1.2 |
| Rmerge | 0.032 | 0.03 | 0.44 |
| CC half | 0.998 | 0.996 | 0.754 |
| Anomalous completeness | 87.4 | 100.0 | 38.2 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 42.774 | 41.516 | 111.079 | 90.0 | 96.678 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
