X-Ray Diffraction data from Bacillus anthracis Prolyl 4-hydroxylase in complex with Cd(II) and AKG, source of 5HV0 structure

Data DOI: 10.15785/SBGRID/382 | ID: 382

Publication DOI: 10.1107/S2059798316004198

5HV0 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Dey Laboratory, University of Iowa

Release Date: Nov. 8, 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/382

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/382 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/382 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/382 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/382 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 382 ; shasum -c files.sha'

Storage requirements: 14G

Biological Sample:

Bacillus anthracis Prolyl 4-hydroxylase in complex with Cd(II) and AKG

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

4.2.2, ALS

Data Creation Date:

Aug. 21, 2014

Related Datasets:

None


Cite this Dataset

Schnicker, NJ; Dey, M. 2016. "X-Ray Diffraction data for: Bacillus anthracis Prolyl 4-hydroxylase in complex with Cd(II) and AKG. PDB Code 5HV0", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/382.

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Dataset Description

High resolution dataset with Cd(II) in space group P3

Project Members

Name Additional Roles Affiliation While Working on the Project
Nicholas J SchnickerData Collector, DepositorUniversity of Iowa
Mishtu Dey, PIUniversity of Iowa

Reprocessing Instructions

This dataset was indexed in space group P3 processed with XDS at 1.63 A resolution.

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.00007

Sweep:

SWEEP1

Files:

/programs/datagrid/382/3-01_1_####.img

Images:

1 - 900

Beam:

(146.95, 151.04) -> (146.95, 146.8)

Distance:

-200.0 -> 199.8

Spacegroup:

P 3

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.55 4.21 1.55
Low resolution limit 39.14 39.16 1.58
Completeness 99.5 99.5 93.7
Multiplicity 5.3 5.7 3.1
I/sigma 9.4 22.6 1.4
Rmerge 0.089 0.057 0.654
CC half 0.996 0.994 0.337
Anomalous completeness 97.0 99.1 73.3
Anomalous multiplicity 2.7 2.7 2.7
Cell 90.401 90.401 51.461 90.0 90.0 120.0

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.