Data DOI: 10.15785/SBGRID/380 | ID: 380
Publication DOI: 10.7554/eLife.20930
5SZR Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Shapiro Laboratory, Columbia University
Release Date: 1 Nov 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/380
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/380 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/380 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/380 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/380 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 380 ; shasum -c files.sha'
Storage requirements: 1.5G
Biological Sample:
Mouse Protocadherin Gamma B2 extracellular cadherin domains 3-6
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24-ID-C
Data Creation Date:
29 Jun 2016
Related Datasets:
None
Goodman, KM; Shapiro, L. 2016. "X-Ray Diffraction data for: Mouse Protocadherin Gamma B2 extracellular cadherin domains 3-6. PDB Code 5SZR", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/380.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kerry M Goodman | Data Collector, Depositor | Columbia University |
| Larry Shapiro | PI | Columbia University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/380/gB2ec36KG242_1_1_####.cbf
Images:
1 - 250
Beam:
(216.33, 222.38) -> (216.33, 222.32)
Distance:
450.0 -> 452.67
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.04 | 5.54 | 2.04 |
| Low resolution limit | 78.1 | 78.16 | 2.08 |
| Completeness | 99.0 | 98.0 | 95.7 |
| Multiplicity | 5.1 | 5.0 | 3.0 |
| I/sigma | 5.4 | 20.1 | 0.3 |
| Rmerge | 0.116 | 0.041 | 2.983 |
| CC half | 0.998 | 0.998 | 0.388 |
| Anomalous completeness | 96.7 | 95.9 | 87.7 |
| Anomalous multiplicity | 2.7 | 2.7 | 2.7 |
| Cell | 104.65 | 104.65 | 352.03 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/380/gB2ec36KG242_1_1_####.cbf
Images:
1 - 250
Beam:
(216.33, 222.38) -> (216.33, 222.34)
Distance:
450.0 -> 451.41
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.04 | 5.54 | 2.04 |
| Low resolution limit | 104.65 | 104.79 | 2.08 |
| Completeness | 99.0 | 98.0 | 95.7 |
| Multiplicity | 5.1 | 5.0 | 3.0 |
| I/sigma | 5.4 | 20.1 | 0.3 |
| Rmerge | 0.116 | 0.041 | 2.96 |
| CC half | 0.998 | 0.998 | 0.381 |
| Anomalous completeness | 96.7 | 96.0 | 87.8 |
| Anomalous multiplicity | 2.7 | 2.7 | 2.7 |
| Cell | 104.65 | 104.65 | 352.03 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/380/gB2ec36KG242_1_1_####.cbf
Images:
1 - 250
Beam:
(216.33, 222.38) -> (216.33, 222.34)
Distance:
450.0 -> 451.3
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.93 | 5.24 | 1.93 |
| Low resolution limit | 104.69 | 104.85 | 1.96 |
| Completeness | 98.1 | 98.4 | 87.5 |
| Multiplicity | 4.7 | 5.1 | 2.2 |
| I/sigma | 2.4 | 15.4 | 0.0 |
| Rmerge | 0.137 | 0.062 | 16.815 |
| CC half | 0.996 | 0.998 | 0.521 |
| Anomalous completeness | 94.5 | 98.5 | 69.8 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 104.691 | 104.691 | 352.256 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
