Data DOI: 10.15785/SBGRID/377 | ID: 377
Publication DOI: 10.7554/eLife.20930
5SZO Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Shapiro Laboratory, Columbia University
Release Date: 1 Nov 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/377
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/377 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/377 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/377 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/377 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 377 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
Mouse Protocadherin Gamma B7 extracellular cadherin domains 1-4 P41212 crystal form
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24-ID-C
Data Creation Date:
25 Oct 2015
Related Datasets:
None
Goodman, KM; Shapiro, L. 2016. "X-Ray Diffraction data for: Mouse Protocadherin Gamma B7 extracellular cadherin domains 1-4 P41212 crystal form. PDB Code 5SZO", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/377.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kerry M Goodman | Data Collector, Depositor | Columbia University |
| Larry Shapiro | PI | Columbia University |
Anisotropic limits of 4.5/4.5/3.6 angstroms along a*/b*/c* were applied.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9793
Sweep:
SWEEP1
Files:
/programs/datagrid/377/gB7SH014_6_1_####.cbf
Images:
1 - 900
Beam:
(216.65, 222.62) -> (216.65, 222.47)
Distance:
600.0 -> 594.51
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.26 | 8.85 | 3.26 |
| Low resolution limit | 97.14 | 97.18 | 3.32 |
| Completeness | 99.9 | 100.0 | 98.2 |
| Multiplicity | 12.8 | 10.7 | 11.9 |
| I/sigma | 6.3 | 34.3 | 0.1 |
| Rmerge | 0.228 | 0.046 | -368.026 |
| CC half | 0.999 | 1.0 | 0.233 |
| Anomalous completeness | 99.3 | 99.9 | 97.7 |
| Anomalous multiplicity | 7.0 | 7.0 | 7.0 |
| Cell | 97.14 | 97.14 | 312.29 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9793
Sweep:
SWEEP1
Files:
/programs/datagrid/377/gB7SH014_6_1_####.cbf
Images:
1 - 900
Beam:
(216.65, 222.62) -> (216.65, 222.47)
Distance:
600.0 -> 597.85
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.28 | 8.9 | 3.28 |
| Low resolution limit | 78.07 | 78.1 | 3.34 |
| Completeness | 99.9 | 100.0 | 98.3 |
| Multiplicity | 12.8 | 10.7 | 11.9 |
| I/sigma | 6.4 | 34.3 | 0.1 |
| Rmerge | 0.227 | 0.046 | -198.768 |
| CC half | 0.999 | 0.999 | 0.224 |
| Anomalous completeness | 99.4 | 99.9 | 97.7 |
| Anomalous multiplicity | 7.0 | 7.0 | 7.0 |
| Cell | 97.14 | 97.14 | 312.3 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9793
Sweep:
SWEEP1
Files:
/programs/datagrid/377/gB7SH014_6_1_####.cbf
Images:
1 - 900
Beam:
(216.65, 222.62) -> (216.65, 222.46)
Distance:
600.0 -> 598.91
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.05 | 8.28 | 3.05 |
| Low resolution limit | 97.4 | 97.45 | 3.1 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 12.8 | 11.5 | 13.3 |
| I/sigma | 2.5 | 23.4 | 0.0 |
| Rmerge | 0.296 | 0.085 | 29.545 |
| CC half | 0.991 | 0.998 | 0.249 |
| Anomalous completeness | 100.0 | 100.0 | 99.9 |
| Anomalous multiplicity | 6.9 | 6.9 | 6.9 |
| Cell | 97.396 | 97.396 | 313.159 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
