Data DOI: 10.15785/SBGRID/374 | ID: 374
Publication DOI: 10.7554/eLife.20930
5SZL Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Shapiro Laboratory, Columbia University
Release Date: Nov. 1, 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/374
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/374 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/374 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/374 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/374 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 374 ; shasum -c files.sha'
Storage requirements: 1.1G
Biological Sample:
Mouse Protocadherin gamma A1 extracellular cadherin domains 1-4
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24-ID-E
Data Creation Date:
March 24, 2016
Related Datasets:
None
Goodman, KM; Shapiro, L. 2016. "X-Ray Diffraction data for: Mouse Protocadherin gamma A1 extracellular cadherin domains 1-4. PDB Code 5SZL", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/374.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kerry M Goodman | Data Collector, Depositor | Columbia University |
| Larry Shapiro | PI | Columbia University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/374/gA1_KG234_5_1_###.img
Images:
1 - 60
Beam:
(148.37, 158.54) -> (148.37, 158.81)
Distance:
550.0 -> 549.68
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 4.64 | 12.59 | 4.64 |
| Low resolution limit | 91.8 | 91.81 | 4.72 |
| Completeness | 100.0 | 98.4 | 100.0 |
| Multiplicity | 3.5 | 3.2 | 3.5 |
| I/sigma | 4.8 | 20.2 | 1.1 |
| Rmerge | 0.193 | 0.025 | 1.137 |
| CC half | 0.996 | 0.999 | 0.493 |
| Anomalous completeness | 98.6 | 99.4 | 98.7 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 108.146 | 108.146 | 462.889 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/374/gA1_KG234_5_1_###.img
Images:
1 - 60
Beam:
(148.37, 158.54) -> (148.37, 158.81)
Distance:
550.0 -> 547.31
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 6.75 | 18.25 | 6.75 |
| Low resolution limit | 79.94 | 79.95 | 6.87 |
| Completeness | 99.3 | 89.8 | 100.0 |
| Multiplicity | 3.4 | 3.0 | 3.6 |
| I/sigma | 12.6 | 32.6 | 2.9 |
| Rmerge | 0.06 | 0.018 | 0.441 |
| CC half | 0.998 | 0.999 | 0.844 |
| Anomalous completeness | 96.4 | 90.2 | 98.3 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 107.9 | 107.9 | 463.23 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/374/gA1_KG234_5_1_###.img
Images:
1 - 60
Beam:
(148.37, 158.54) -> (148.37, 158.81)
Distance:
550.0 -> 548.36
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 6.82 | 18.47 | 6.82 |
| Low resolution limit | 91.5 | 91.51 | 6.94 |
| Completeness | 99.3 | 90.2 | 100.0 |
| Multiplicity | 3.4 | 2.9 | 3.5 |
| I/sigma | 13.2 | 33.3 | 3.5 |
| Rmerge | 0.056 | 0.02 | 0.368 |
| CC half | 0.998 | 0.998 | 0.851 |
| Anomalous completeness | 96.5 | 91.0 | 98.7 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 107.78 | 107.78 | 462.72 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
