Data DOI: 10.15785/SBGRID/374 | ID: 374
Publication DOI: 10.7554/eLife.20930
5SZL Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Shapiro Laboratory, Columbia University
Release Date: 1 Nov 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/374
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/374 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/374 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/374 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/374 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 374 ; shasum -c files.sha'
Storage requirements: 1.1G
Biological Sample:
Mouse Protocadherin gamma A1 extracellular cadherin domains 1-4
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24-ID-E
Data Creation Date:
24 Mar 2016
Related Datasets:
None
Goodman, KM; Shapiro, L. 2016. "X-Ray Diffraction data for: Mouse Protocadherin gamma A1 extracellular cadherin domains 1-4. PDB Code 5SZL", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/374.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kerry M Goodman | Data Collector, Depositor | Columbia University |
| Larry Shapiro | PI | Columbia University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/374/gA1_KG234_5_1_###.img
Images:
1 - 60
Beam:
(148.37, 158.54) -> (148.37, 158.81)
Distance:
550.0 -> 547.31
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 4.35 | 11.8 | 4.35 |
| Low resolution limit | 79.91 | 79.92 | 4.43 |
| Completeness | 99.8 | 97.8 | 99.1 |
| Multiplicity | 3.5 | 3.1 | 3.6 |
| I/sigma | 4.5 | 25.9 | 0.8 |
| Rmerge | 0.216 | 0.024 | 1.417 |
| CC half | 0.997 | 0.999 | 0.476 |
| Anomalous completeness | 97.8 | 94.7 | 97.0 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 107.85 | 107.85 | 463.01 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/374/gA1_KG234_5_1_###.img
Images:
1 - 60
Beam:
(148.37, 158.54) -> (148.37, 158.81)
Distance:
550.0 -> 548.36
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 4.28 | 11.61 | 4.28 |
| Low resolution limit | 91.51 | 91.53 | 4.35 |
| Completeness | 99.8 | 97.7 | 99.8 |
| Multiplicity | 3.5 | 3.1 | 3.6 |
| I/sigma | 4.6 | 27.1 | 0.8 |
| Rmerge | 0.219 | 0.024 | 1.556 |
| CC half | 0.996 | 0.999 | 0.292 |
| Anomalous completeness | 97.9 | 95.9 | 97.2 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 107.8 | 107.8 | 462.77 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/374/gA1_KG234_5_1_###.img
Images:
1 - 60
Beam:
(148.37, 158.54) -> (148.37, 158.79)
Distance:
550.0 -> 546.77
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 5.71 | 15.48 | 5.71 |
| Low resolution limit | 93.23 | 93.24 | 5.81 |
| Completeness | 100.0 | 98.4 | 100.0 |
| Multiplicity | 3.4 | 3.0 | 3.6 |
| I/sigma | 10.9 | 44.2 | 3.9 |
| Rmerge | 0.211 | 0.043 | 0.783 |
| CC half | 0.96 | 0.991 | 0.19 |
| Anomalous completeness | 98.7 | 100.0 | 99.5 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 107.65 | 107.65 | 462.111 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
