Data DOI: 10.15785/SBGRID/364 | ID: 364
5TEU Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Crosson Laboratory, University of Chicago
Release Date: Sept. 23, 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/364
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/364 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/364 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/364 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/364 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 364 ; shasum -c files.sha'
Storage requirements: 2.7G
Biological Sample:
Brucella periplasmic binding protein YehZ
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS sector 21 beamline ID-F
Data Creation Date:
July 2, 2013
Related Datasets:
None
Herrou, J; Crosson, S. 2016. "X-Ray Diffraction data for: Brucella periplasmic binding protein YehZ. PDB Code 5TEU", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/364.
native x-ray diffraction dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Julien Herrou | Data Collector | University of Chicago |
| Sean Crosson | Data Collector, Depositor, PI | University of Chicago |
data were processed in xia2 using the -3da flag. The resolution is 1.62; space group is P42 21 2
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/364/226_7.###
Images:
1 - 150
Beam:
(112.35, 112.06) -> (112.35, 112.21)
Distance:
140.0 -> 139.99
Spacegroup:
P 42 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.45 | 3.93 | 1.45 |
| Low resolution limit | 40.66 | 40.68 | 1.48 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 12.0 | 11.6 | 9.5 |
| I/sigma | 10.1 | 19.8 | 1.3 |
| Rmerge | 0.089 | 0.037 | 2.264 |
| CC half | 0.999 | 0.998 | 0.342 |
| Anomalous completeness | 100.0 | 99.8 | 100.0 |
| Anomalous multiplicity | 6.2 | 6.2 | 6.2 |
| Cell | 111.403 | 111.403 | 121.979 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/364/226_7.###
Images:
1 - 150
Beam:
(112.35, 112.06) -> (112.35, 112.11)
Distance:
140.0 -> 139.76
Spacegroup:
P 42 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.48 | 4.02 | 1.48 |
| Low resolution limit | 49.81 | 49.83 | 1.51 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 12.2 | 11.3 | 12.2 |
| I/sigma | 19.9 | 62.1 | 1.1 |
| Rmerge | 0.066 | 0.028 | 2.179 |
| CC half | 0.999 | 0.999 | 0.421 |
| Anomalous completeness | 100.0 | 100.0 | 99.9 |
| Anomalous multiplicity | 6.4 | 6.4 | 6.4 |
| Cell | 111.37 | 111.37 | 122.0 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/364/226_7.###
Images:
1 - 150
Beam:
(112.35, 112.06) -> (112.35, 112.11)
Distance:
140.0 -> 139.82
Spacegroup:
P 42 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.48 | 4.02 | 1.48 |
| Low resolution limit | 55.69 | 55.72 | 1.51 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 12.2 | 11.3 | 12.2 |
| I/sigma | 19.9 | 62.1 | 1.1 |
| Rmerge | 0.066 | 0.028 | 2.18 |
| CC half | 0.999 | 0.999 | 0.446 |
| Anomalous completeness | 100.0 | 100.0 | 99.9 |
| Anomalous multiplicity | 6.4 | 6.4 | 6.4 |
| Cell | 111.37 | 111.37 | 122.0 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/364/226_7.###
Images:
1 - 150
Beam:
(112.35, 112.06) -> (112.35, 112.17)
Distance:
140.0 -> 139.82
Spacegroup:
P 42 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.47 | 3.99 | 1.47 |
| Low resolution limit | 61.01 | 61.06 | 1.5 |
| Completeness | 100.0 | 100.0 | 99.1 |
| Multiplicity | 12.3 | 11.6 | 11.7 |
| I/sigma | 17.2 | 50.9 | 1.0 |
| Rmerge | 0.075 | 0.031 | 2.66 |
| CC half | 0.997 | 0.991 | 0.523 |
| Anomalous completeness | 99.9 | 99.7 | 99.1 |
| Anomalous multiplicity | 6.4 | 6.4 | 6.4 |
| Cell | 111.409 | 111.409 | 122.023 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
