Data DOI: 10.15785/SBGRID/360 | ID: 360
5L1X Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McLellan Laboratory, University of Texas at Austin
Release Date: 30 Aug 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/360
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/360 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/360 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/360 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/360 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 360 ; shasum -c files.sha'
Storage requirements: 9.2G
Biological Sample:
human metapneumovirus fusion protein in postfusion conformation
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
19-ID, SBC, APS, Chicago, IL
Data Creation Date:
24 Jul 2015
Related Datasets:
None
McLellan, JS. 2016. "X-Ray Diffraction data for: human metapneumovirus fusion protein in postfusion conformation. PDB Code 5L1X", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/360.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Jason S McLellan | Data Collector, Depositor | Geisel School of Medicine at Dartmouth |
| Jason McLellan | PI | University of Texas at Austin |
reverse direction of spindle rotation Beam center, as defined in image headers, needs to be correct to: X=153.123 Y=162.511 Frames 1-120 and 361-520 were used to generate the mtz file used for structure determination
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97934
Sweep:
SWEEP1
Files:
/programs/datagrid/360/hMPVPostF_P4P10_T2.####.img
Images:
1 - 520
Beam:
(154.5, 159.98) -> (154.5, 162.54)
Distance:
496.63 -> 496.87
Spacegroup:
P 4 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.89 | 7.84 | 2.89 |
| Low resolution limit | 62.28 | 62.29 | 2.94 |
| Completeness | 99.8 | 98.5 | 100.0 |
| Multiplicity | 9.3 | 8.9 | 5.0 |
| I/sigma | 8.6 | 24.4 | 0.6 |
| Rmerge | 0.266 | 0.069 | 2.283 |
| CC half | 0.995 | 0.997 | 0.386 |
| Anomalous completeness | 99.8 | 99.7 | 99.2 |
| Anomalous multiplicity | 5.0 | 5.0 | 5.0 |
| Cell | 128.79 | 128.79 | 245.04 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97934
Sweep:
SWEEP1
Files:
/programs/datagrid/360/hMPVPostF_P4P10_T2.####.img
Images:
1 - 520
Beam:
(154.5, 159.98) -> (154.5, 162.53)
Distance:
496.63 -> 497.41
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.41 | 9.24 | 3.41 |
| Low resolution limit | 62.31 | 62.32 | 3.47 |
| Completeness | 94.4 | 91.4 | 90.9 |
| Multiplicity | 2.9 | 3.0 | 2.9 |
| I/sigma | 5.0 | 29.5 | 0.8 |
| Rmerge | 0.383 | 0.197 | 3.14 |
| CC half | 0.597 | 0.527 | 0.108 |
| Anomalous completeness | 86.9 | 88.3 | 83.4 |
| Anomalous multiplicity | 1.5 | 1.5 | 1.5 |
| Cell | 181.912 | 182.393 | 244.931 | 90.0 | 90.127 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
