Data DOI: 10.15785/SBGRID/337 | ID: 337
Publication DOI: 10.1107/S2059798316012419
5J1D Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Murthy Laboratory, Indian Institute of Science
Release Date: July 29, 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/337
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/337 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/337 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/337 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/337 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 337 ; shasum -c files.sha'
Storage requirements: 1.4G
Biological Sample:
Stenotrophomonas maltophilia phosphate binding protein
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
home source
Data Creation Date:
March 23, 2011
Related Datasets:
None
Hatti, K; Gulati, A; Murthy, M; Srinivasan, N; Murthy, M. 2016. "X-Ray Diffraction data for: Stenotrophomonas maltophilia phosphate binding protein. PDB Code 5J1D", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/337.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kaushik Hatti | Depositor | Indian Institute of Science |
| Ashutosh Gulati | Data Collector | Indian Institute of Science |
| MRN Murthy | Indian Institute of Science | |
| Narayanaswamy Srinivasan | Indian Institute of Science | |
| M.R.N. Murthy | PI | Indian Institute of Science |
None
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP2
Files:
/programs/datagrid/337/hg_acetate_dc_###.mar2300
Images:
55 - 479
Beam:
(172.5, 172.5) -> (172.5, 172.22)
Distance:
150.0 -> 149.94
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.87 | 5.06 | 1.87 |
| Low resolution limit | 26.02 | 26.03 | 1.9 |
| Completeness | 100.0 | 100.0 | 99.6 |
| Multiplicity | 4.9 | 5.0 | 4.5 |
| I/sigma | 14.1 | 23.8 | 4.9 |
| Rmerge | 0.074 | 0.029 | 0.247 |
| CC half | 0.996 | 0.996 | 0.915 |
| Anomalous completeness | 99.5 | 100.0 | 94.0 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 37.788 | 78.075 | 56.395 | 90.0 | 102.366 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP2
Files:
/programs/datagrid/337/hg_acetate_dc_###.mar2300
Images:
55 - 479
Beam:
(172.5, 172.5) -> (172.5, 173.12)
Distance:
150.0 -> 149.37
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.87 | 5.07 | 1.87 |
| Low resolution limit | 26.82 | 26.82 | 1.9 |
| Completeness | 99.8 | 99.4 | 99.9 |
| Multiplicity | 4.8 | 4.9 | 4.5 |
| I/sigma | 15.6 | 32.1 | 5.0 |
| Rmerge | 0.055 | 0.024 | 0.203 |
| CC half | 0.998 | 0.999 | 0.949 |
| Anomalous completeness | 96.9 | 96.5 | 93.5 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 37.78 | 78.07 | 56.35 | 90.0 | 102.37 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP2
Files:
/programs/datagrid/337/hg_acetate_dc_###.mar2300
Images:
55 - 479
Beam:
(172.5, 172.5) -> (172.5, 173.12)
Distance:
150.0 -> 149.7
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.87 | 5.06 | 1.87 |
| Low resolution limit | 26.36 | 26.36 | 1.9 |
| Completeness | 99.8 | 99.4 | 99.9 |
| Multiplicity | 4.8 | 4.9 | 4.5 |
| I/sigma | 15.6 | 32.1 | 5.0 |
| Rmerge | 0.055 | 0.024 | 0.202 |
| CC half | 0.998 | 0.999 | 0.949 |
| Anomalous completeness | 96.9 | 96.6 | 93.7 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 37.78 | 78.07 | 56.35 | 90.0 | 102.37 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP2
Files:
/programs/datagrid/337/hg_acetate_dc_###.mar2300
Images:
55 - 479
Beam:
(172.5, 172.5) -> (172.5, 173.12)
Distance:
150.0 -> 149.54
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.86 | 5.05 | 1.86 |
| Low resolution limit | 33.31 | 33.32 | 1.9 |
| Completeness | 99.9 | 100.0 | 96.2 |
| Multiplicity | 4.9 | 5.0 | 4.3 |
| I/sigma | 14.8 | 23.1 | 5.8 |
| Rmerge | 0.065 | 0.029 | 0.198 |
| CC half | 0.997 | 0.997 | 0.947 |
| Anomalous completeness | 99.1 | 100.0 | 87.9 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 37.725 | 77.948 | 56.263 | 90.0 | 102.373 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
