Data DOI: 10.15785/SBGRID/337 | ID: 337
Publication DOI: 10.1107/S2059798316012419
5J1D Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Murthy Laboratory, Indian Institute of Science
Release Date: 29 Jul 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/337
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/337 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/337 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/337 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/337 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 337 ; shasum -c files.sha'
Storage requirements: 1.4G
Biological Sample:
Stenotrophomonas maltophilia phosphate binding protein
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
home source
Data Creation Date:
23 Mar 2011
Related Datasets:
None
Hatti, K; Gulati, A; Murthy, M; Srinivasan, N; Murthy, M. 2016. "X-Ray Diffraction data for: Stenotrophomonas maltophilia phosphate binding protein. PDB Code 5J1D", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/337.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kaushik Hatti | Depositor | Indian Institute of Science |
| Ashutosh Gulati | Data Collector | Indian Institute of Science |
| MRN Murthy | Indian Institute of Science | |
| Narayanaswamy Srinivasan | Indian Institute of Science | |
| M.R.N. Murthy | PI | Indian Institute of Science |
None
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/337/hg_acetate_dc_###.mar2300
Images:
1 - 479
Beam:
(172.5, 172.5) -> (172.5, 173.12)
Distance:
150.0 -> 149.54
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.87 | 5.06 | 1.87 |
| Low resolution limit | 23.52 | 23.52 | 1.9 |
| Completeness | 99.8 | 99.5 | 100.0 |
| Multiplicity | 4.8 | 4.9 | 4.5 |
| I/sigma | 19.7 | 40.4 | 6.4 |
| Rmerge | 0.055 | 0.023 | 0.204 |
| CC half | 0.998 | 0.999 | 0.948 |
| Anomalous completeness | 96.7 | 96.5 | 94.3 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 37.77 | 78.05 | 56.33 | 90.0 | 102.37 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/337/hg_acetate_dc_###.mar2300
Images:
1 - 479
Beam:
(172.5, 172.5) -> (172.5, 173.12)
Distance:
150.0 -> 149.66
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.87 | 5.07 | 1.87 |
| Low resolution limit | 27.51 | 27.51 | 1.9 |
| Completeness | 99.8 | 99.3 | 100.0 |
| Multiplicity | 4.8 | 4.9 | 4.5 |
| I/sigma | 19.6 | 40.3 | 6.4 |
| Rmerge | 0.055 | 0.023 | 0.204 |
| CC half | 0.998 | 0.999 | 0.952 |
| Anomalous completeness | 96.7 | 96.4 | 94.1 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 37.77 | 78.05 | 56.33 | 90.0 | 102.37 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/337/hg_acetate_dc_###.mar2300
Images:
1 - 479
Beam:
(172.5, 172.5) -> (172.5, 173.13)
Distance:
150.0 -> 149.61
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.8 | 4.88 | 1.8 |
| Low resolution limit | 31.33 | 31.34 | 1.83 |
| Completeness | 96.5 | 100.0 | 66.3 |
| Multiplicity | 4.8 | 5.0 | 3.2 |
| I/sigma | 12.0 | 26.3 | -0.3 |
| Rmerge | 0.087 | 0.036 | -0.367 |
| CC half | 0.961 | 0.996 | 0.724 |
| Anomalous completeness | 94.9 | 100.0 | 54.6 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 37.762 | 78.016 | 56.319 | 90.0 | 102.362 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
