Data DOI: 10.15785/SBGRID/334 | ID: 334
Publication DOI: 10.1016/j.str.2016.09.017
5KTE Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Gaudet Laboratory, Harvard University
Release Date: 15 Nov 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/334
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/334 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/334 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/334 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/334 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 334 ; shasum -c files.sha'
Storage requirements: 2.8G
Biological Sample:
Deinococcus radiodurans MntH in complex with Fab
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
24-ID-C, NE-CAT, APS, Chicago, IL.
Data Creation Date:
24 Feb 2011
Related Datasets:
Bane, L; Weihofen, W; Gaudet, R. 2016. "X-Ray Diffraction data for: Deinococcus radiodurans MntH in complex with Fab. PDB Code 5KTE", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/334.
The second of two osmium containing data sets.
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Lukas Bane | Depositor | Harvard University |
| Wilhelm Weihofen | Data Collector | Harvard University |
| Rachelle Gaudet | PI | Harvard University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.13988
Sweep:
SWEEP2
Files:
/programs/datagrid/334/118A2_os_2_1_###.img
Images:
1 - 31
Beam:
(156.71, 156.32) -> (156.71, 156.36)
Distance:
500.0 -> 497.08
Spacegroup:
I 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.51 | 9.51 | 3.51 |
| Low resolution limit | 50.73 | 50.74 | 3.57 |
| Completeness | 95.0 | 93.8 | 83.8 |
| Multiplicity | 4.8 | 4.4 | 2.9 |
| I/sigma | 8.2 | 44.8 | 0.4 |
| Rmerge | 0.105 | 0.04 | 1.902 |
| CC half | 0.974 | 0.965 | 0.355 |
| Anomalous completeness | 88.8 | 85.6 | 67.0 |
| Anomalous multiplicity | 2.6 | 2.6 | 2.6 |
| Cell | 113.52 | 131.8 | 220.56 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.13988
Sweep:
SWEEP2
Files:
/programs/datagrid/334/118A2_os_2_1_###.img
Images:
1 - 31
Beam:
(156.71, 156.32) -> (156.71, 156.36)
Distance:
500.0 -> 496.59
Spacegroup:
I 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.53 | 9.56 | 3.53 |
| Low resolution limit | 50.73 | 50.74 | 3.59 |
| Completeness | 95.2 | 93.7 | 83.7 |
| Multiplicity | 4.8 | 4.6 | 3.0 |
| I/sigma | 7.8 | 37.8 | 0.6 |
| Rmerge | 0.102 | 0.041 | 1.854 |
| CC half | 0.979 | 0.951 | 0.29 |
| Anomalous completeness | 89.4 | 92.4 | 66.7 |
| Anomalous multiplicity | 2.6 | 2.6 | 2.6 |
| Cell | 113.52 | 131.8 | 220.55 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.13988
Sweep:
SWEEP2
Files:
/programs/datagrid/334/118A2_os_2_1_###.img
Images:
1 - 31
Beam:
(156.71, 156.32) -> (156.71, 156.34)
Distance:
500.0 -> 483.63
Spacegroup:
I 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.34 | 9.05 | 3.34 |
| Low resolution limit | 110.22 | 110.28 | 3.39 |
| Completeness | 95.3 | 98.2 | 26.2 |
| Multiplicity | 5.0 | 4.9 | 2.3 |
| I/sigma | 3.2 | 36.0 | 0.0 |
| Rmerge | 0.165 | 0.074 | -41.994 |
| CC half | 0.941 | 0.93 | 0.019 |
| Anomalous completeness | 92.7 | 99.9 | 15.3 |
| Anomalous multiplicity | 2.7 | 2.7 | 2.7 |
| Cell | 113.582 | 127.832 | 217.631 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
