X-Ray Diffraction data from Deinococcus radiodurans MntH in complex with Fab, source of 5KTE structure

Data DOI: 10.15785/SBGRID/334 | ID: 334

Publication DOI: 10.1016/j.str.2016.09.017

5KTE Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Gaudet Laboratory, Harvard University

Release Date: Nov. 15, 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/334

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/334 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/334 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/334 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/334 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 334 ; shasum -c files.sha'

Storage requirements: 2.8G

Biological Sample:

Deinococcus radiodurans MntH in complex with Fab

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

24-ID-C, NE-CAT, APS, Chicago, IL.

Data Creation Date:

Feb. 24, 2011

Related Datasets:

332, 333


Cite this Dataset

Bane, L; Weihofen, W; Gaudet, R. 2016. "X-Ray Diffraction data for: Deinococcus radiodurans MntH in complex with Fab. PDB Code 5KTE", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/334.

Download Citation

Dataset Description

The second of two osmium containing data sets.

Project Members

Name Additional Roles Affiliation While Working on the Project
Lukas BaneDepositorHarvard University
Wilhelm WeihofenData CollectorHarvard University
Rachelle GaudetPIHarvard University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.13988

Sweep:

SWEEP2

Files:

/programs/datagrid/334/118A2_os_2_1_###.img

Images:

1 - 31

Beam:

(156.71, 156.32) -> (156.71, 156.36)

Distance:

500.0 -> 497.48

Spacegroup:

I 2 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 4.57 12.35 4.57
Low resolution limit 50.73 50.74 4.65
Completeness 91.1 88.3 88.1
Multiplicity 4.8 4.4 4.7
I/sigma 15.0 40.3 4.9
Rmerge 0.061 0.038 0.346
CC half 0.978 0.961 0.979
Anomalous completeness 84.5 87.9 77.8
Anomalous multiplicity 2.7 2.7 2.7
Cell 113.52 131.8 220.55 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.13988

Sweep:

SWEEP2

Files:

/programs/datagrid/334/118A2_os_2_1_###.img

Images:

1 - 31

Beam:

(156.71, 156.32) -> (156.71, 156.36)

Distance:

500.0 -> 497.62

Spacegroup:

I 2 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 4.05 10.97 4.05
Low resolution limit 55.18 55.18 4.12
Completeness 94.2 91.0 83.3
Multiplicity 5.0 4.5 4.6
I/sigma 11.0 40.6 1.1
Rmerge 0.082 0.04 1.824
CC half 0.979 0.966 0.534
Anomalous completeness 89.5 90.2 74.0
Anomalous multiplicity 2.7 2.7 2.7
Cell 113.51 131.79 220.53 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.13988

Sweep:

SWEEP2

Files:

/programs/datagrid/334/118A2_os_2_1_###.img

Images:

1 - 31

Beam:

(156.71, 156.32) -> (156.71, 156.34)

Distance:

500.0 -> 486.77

Spacegroup:

I 2 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.82 10.36 3.82
Low resolution limit 56.72 56.73 3.89
Completeness 92.5 92.0 28.7
Multiplicity 4.9 4.7 2.8
I/sigma 5.7 18.2 0.7
Rmerge 0.126 0.056 0.84
CC half 0.983 0.973 0.723
Anomalous completeness 88.9 94.4 20.9
Anomalous multiplicity 2.7 2.7 2.7
Cell 113.446 128.68 218.308 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.