X-Ray Diffraction data from S. cerevisiae Csm1:Ulp2 complex, source of 5V1A structure

Data DOI: 10.15785/SBGRID/327 | ID: 327

Publication DOI: 10.1101/gad.296145.117

5V1A Coordinates: Viewer, PDB, MMDB

Corbett Laboratory, University of California, San Diego

Release Date: 9 May 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/327

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/327 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/327 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/327 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/327 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 327 ; shasum -c files.sha'

Storage requirements: 5.7G

Biological Sample:

S. cerevisiae Csm1:Ulp2 complex

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

SSRL Beamline 14-1

Data Creation Date:

1 Jun 2016

Related Datasets:

None


Cite this Dataset

Singh, N; Corbett, KD. 2017. "X-Ray Diffraction data for: S. cerevisiae Csm1:Ulp2 complex. PDB Code 5V1A", SBGrid Data Bank, V1, http://dx.doi.org/10.15785/SBGRID/327.

Download Citation

Dataset Description

Native dataset for S. cerevisiae Csm1:Ulp2 complex

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorUC San Diego, Ludwig Institute for Cancer Research
Namit SinghData CollectorLudwig Institute for Cancer Research
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

Space Group P43212

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.18076

Sweep:

SWEEP1

Files:

/programs/datagrid/327/K4_7_#####.mccd

Images:

1 - 180

Beam:

(162.5, 162.5) -> (162.5, 162.45)

Distance:

260.0 -> 259.99

Spacegroup:

P 4 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.1 5.7 2.1
Low resolution limit 43.77 43.78 2.14
Completeness 97.6 97.0 85.7
Multiplicity 13.7 11.8 12.3
I/sigma 25.4 69.0 1.2
Rmerge 0.052 0.027 2.069
CC half 1.0 1.0 0.368
Anomalous completeness 98.9 100.0 87.7
Anomalous multiplicity 7.7 7.7 7.7
Cell 46.751 46.751 124.663 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.18076

Sweep:

SWEEP1

Files:

/programs/datagrid/327/K4_7_#####.mccd

Images:

1 - 180

Beam:

(162.5, 162.5) -> (162.5, 162.3)

Distance:

260.0 -> 260.12

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.13 5.74 2.13
Low resolution limit 20.8 20.8 2.17
Completeness 99.2 100.0 97.5
Multiplicity 13.8 11.6 13.8
I/sigma 37.1 111.5 1.5
Rmerge 0.038 0.017 1.73
CC half 1.0 1.0 0.555
Anomalous completeness 99.6 100.0 98.5
Anomalous multiplicity 7.8 7.8 7.8
Cell 46.8 46.8 124.79 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.18076

Sweep:

SWEEP1

Files:

/programs/datagrid/327/K4_7_#####.mccd

Images:

1 - 180

Beam:

(162.5, 162.5) -> (162.5, 162.31)

Distance:

260.0 -> 260.06

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.13 5.78 2.13
Low resolution limit 41.6 41.6 2.17
Completeness 99.2 100.0 97.5
Multiplicity 13.8 11.4 13.8
I/sigma 37.1 110.2 1.5
Rmerge 0.038 0.017 1.73
CC half 1.0 1.0 0.563
Anomalous completeness 99.7 100.0 98.5
Anomalous multiplicity 7.8 7.8 7.8
Cell 46.8 46.8 124.79 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.18076

Sweep:

SWEEP1

Files:

/programs/datagrid/327/K4_7_#####.mccd

Images:

1 - 180

Beam:

(162.5, 162.5) -> (162.5, 162.4)

Distance:

260.0 -> 260.29

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.08 5.64 2.08
Low resolution limit 62.4 62.43 2.12
Completeness 98.2 100.0 83.2
Multiplicity 13.7 11.5 11.8
I/sigma 30.1 88.2 2.0
Rmerge 0.038 0.017 0.899
CC half 1.0 1.0 0.537
Anomalous completeness 98.5 100.0 82.9
Anomalous multiplicity 7.7 7.7 7.7
Cell 46.797 46.797 124.799 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.