Data DOI: 10.15785/SBGRID/319 | ID: 319
Publication DOI: 10.1016/j.str.2016.03.001
4YPL Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Chang Laboratory, Academia Sinica
Release Date: 31 May 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/319
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/319 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/319 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/319 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/319 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 319 ; shasum -c files.sha'
Storage requirements: 4.7G
Biological Sample:
Structural Insights into the Allosteric Operation of the Lon AAA+ Protease
Dataset Type:
X-Ray Diffraction
Subject Composition:
DNA, Ligand, Protein
Collection Facility:
BL44XU, SPring8
Data Creation Date:
22 Nov 2014
Related Datasets:
None
Su, M; Lin, C; Chang, C. 2016. "X-Ray Diffraction data for: Structural Insights into the Allosteric Operation of the Lon AAA+ Protease . PDB Code 4YPL", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/319.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Ming-Yuan Su | Depositor | Academia Sinica |
| Chien-Chu Lin | Data Collector | Academia Sinica |
| Chung-I Chang | PI | Academia Sinica |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9
Sweep:
SWEEP1
Files:
/programs/datagrid/319/SP21_######.img
Images:
1 - 150
Beam:
(150.0, 150.0) -> (150.0, 149.8)
Distance:
482.0 -> 481.65
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.97 | 8.05 | 2.97 |
| Low resolution limit | 50.47 | 50.48 | 3.02 |
| Completeness | 99.9 | 98.8 | 99.8 |
| Multiplicity | 6.1 | 5.5 | 5.7 |
| I/sigma | 6.7 | 20.3 | 0.7 |
| Rmerge | 0.226 | 0.054 | 2.691 |
| CC half | 0.993 | 0.996 | 0.33 |
| Anomalous completeness | 99.2 | 98.1 | 98.8 |
| Anomalous multiplicity | 3.2 | 3.2 | 3.2 |
| Cell | 169.24 | 169.28 | 135.45 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9
Sweep:
SWEEP1
Files:
/programs/datagrid/319/SP21_######.img
Images:
1 - 150
Beam:
(150.0, 150.0) -> (150.0, 149.8)
Distance:
482.0 -> 483.05
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.97 | 8.06 | 2.97 |
| Low resolution limit | 66.07 | 66.09 | 3.02 |
| Completeness | 99.8 | 98.7 | 99.8 |
| Multiplicity | 6.1 | 5.5 | 5.7 |
| I/sigma | 6.7 | 20.3 | 0.7 |
| Rmerge | 0.226 | 0.054 | 2.708 |
| CC half | 0.993 | 0.996 | 0.329 |
| Anomalous completeness | 99.2 | 98.0 | 98.8 |
| Anomalous multiplicity | 3.2 | 3.2 | 3.2 |
| Cell | 169.22 | 169.26 | 135.43 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9
Sweep:
SWEEP1
Files:
/programs/datagrid/319/SP21_######.img
Images:
1 - 150
Beam:
(150.0, 150.0) -> (150.0, 149.9)
Distance:
482.0 -> 483.22
Spacegroup:
P 2 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.97 | 8.05 | 2.97 |
| Low resolution limit | 67.26 | 67.27 | 3.02 |
| Completeness | 99.7 | 98.8 | 97.6 |
| Multiplicity | 6.2 | 5.9 | 6.0 |
| I/sigma | 3.2 | 26.8 | 0.1 |
| Rmerge | 0.294 | 0.077 | 36.7 |
| CC half | 0.955 | 0.93 | 0.189 |
| Anomalous completeness | 99.6 | 99.8 | 97.5 |
| Anomalous multiplicity | 3.3 | 3.3 | 3.3 |
| Cell | 134.513 | 168.281 | 168.356 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
