X-Ray Diffraction data from Hexameric structure of a LonA protease domain in active state, source of 5E7S structure

Data DOI: 10.15785/SBGRID/316 | ID: 316

Publication DOI: 10.1016/j.str.2016.03.003

5E7S Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Chang Laboratory, Academia Sinica

Release Date: May 31, 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/316

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/316 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/316 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/316 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/316 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 316 ; shasum -c files.sha'

Storage requirements: 7.6G

Biological Sample:

Hexameric structure of a LonA protease domain in active state

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

BL15A, NSRRC

Data Creation Date:

June 19, 2014

Related Datasets:

None


Cite this Dataset

Su, M; Lin, C; Chang, C. 2016. "X-Ray Diffraction data for: Hexameric structure of a LonA protease domain in active state. PDB Code 5E7S", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/316.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Ming-Yuan SuDepositorAcademia Sinica
Chien-Chu LinData CollectorAcademia Sinica
Chung-I ChangPIAcademia Sinica

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/316/Mta_AP_5-1_C4_1_1_###.mccd

Images:

1 - 241

Beam:

(150.0, 150.0) -> (150.0, 150.03)

Distance:

350.0 -> 349.79

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.61 7.08 2.61
Low resolution limit 106.21 106.3 2.66
Completeness 97.4 99.9 96.7
Multiplicity 4.8 4.8 4.8
I/sigma 5.5 11.6 1.4
Rmerge 0.149 0.07 0.913
CC half 0.989 0.99 0.288
Anomalous completeness 96.2 98.8 95.2
Anomalous multiplicity 2.4 2.4 2.4
Cell 116.2 212.42 178.831 90.0 100.772 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/316/Mta_AP_5-1_C4_1_1_###.mccd

Images:

1 - 241

Beam:

(150.0, 150.0) -> (150.0, 149.95)

Distance:

350.0 -> 355.26

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.61 7.05 2.61
Low resolution limit 27.79 27.79 2.65
Completeness 99.7 99.3 100.0
Multiplicity 5.1 4.7 5.2
I/sigma 9.6 29.0 1.0
Rmerge 0.095 0.032 1.628
CC half 0.998 0.998 0.399
Anomalous completeness 97.3 96.3 99.4
Anomalous multiplicity 2.6 2.6 2.6
Cell 116.28 212.75 178.81 90.0 100.79 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/316/Mta_AP_5-1_C4_1_1_###.mccd

Images:

1 - 241

Beam:

(150.0, 150.0) -> (150.0, 149.91)

Distance:

350.0 -> 349.16

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.62 7.07 2.62
Low resolution limit 27.46 27.46 2.67
Completeness 99.7 99.3 99.9
Multiplicity 5.1 4.7 5.2
I/sigma 9.7 29.0 1.0
Rmerge 0.094 0.033 1.629
CC half 0.998 0.998 0.403
Anomalous completeness 97.5 96.1 99.2
Anomalous multiplicity 2.6 2.6 2.6
Cell 116.28 212.75 178.81 90.0 100.79 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/316/Mta_AP_5-1_C4_1_1_###.mccd

Images:

1 - 241

Beam:

(150.0, 150.0) -> (150.0, 150.0)

Distance:

350.0 -> 348.78

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.58 6.98 2.58
Low resolution limit 37.03 37.04 2.62
Completeness 99.7 99.6 93.6
Multiplicity 5.2 4.9 5.2
I/sigma 5.8 13.9 0.9
Rmerge 0.142 0.064 1.66
CC half 0.992 0.993 0.449
Anomalous completeness 99.4 97.2 93.5
Anomalous multiplicity 2.6 2.6 2.6
Cell 116.326 212.836 178.862 90.0 100.785 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.