Data DOI: 10.15785/SBGRID/310 | ID: 310
Publication DOI: 10.3389/fchem.2016.00023
5DW6 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Kappock Laboratory, Purdue University
Release Date: 31 May 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/310
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/310 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/310 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/310 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/310 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 310 ; shasum -c files.sha'
Storage requirements: 8.8G
Biological Sample:
succinyl-CoA:acetate CoA-transferase (EC 2.8.3.18)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
beamline 21-ID-F, LS-CAT, APS, Chicago, IL
Data Creation Date:
12 Jul 2015
Related Datasets:
None
Murphy, JR.; Kappock, T. 2016. "X-Ray Diffraction data for: succinyl-CoA:acetate CoA-transferase (EC 2.8.3.18). PDB Code 5DW6", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/310.
Succinyl-CoA:acetate CoA-transferase (AarCH6) bound to acetate and the CoA analogue 3'-phosphoadenosine 5'-(O-(N-propyl-R-pantothenamide))pyrophosphate (MX)
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Jesse R. Murphy | Purdue University | |
| T. Joseph Kappock | Data Collector, Depositor, PI | Purdue University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/310/122MA_2_1_9.###
Images:
1 - 500
Beam:
(112.36, 112.04) -> (112.36, 112.71)
Distance:
150.0 -> 150.35
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.4 | 3.8 | 1.4 |
| Low resolution limit | 50.18 | 50.22 | 1.42 |
| Completeness | 99.3 | 100.0 | 90.7 |
| Multiplicity | 7.2 | 7.5 | 3.4 |
| I/sigma | 14.4 | 40.8 | 0.8 |
| Rmerge | 0.058 | 0.031 | 1.292 |
| CC half | 0.999 | 0.999 | 0.308 |
| Anomalous completeness | 97.8 | 99.8 | 79.6 |
| Anomalous multiplicity | 3.7 | 3.7 | 3.7 |
| Cell | 67.47 | 110.49 | 120.03 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/310/122MA_2_1_9.###
Images:
1 - 500
Beam:
(112.36, 112.04) -> (112.36, 112.72)
Distance:
150.0 -> 150.55
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.4 | 3.8 | 1.4 |
| Low resolution limit | 60.01 | 60.07 | 1.42 |
| Completeness | 99.3 | 100.0 | 90.7 |
| Multiplicity | 7.2 | 7.5 | 3.4 |
| I/sigma | 14.4 | 40.8 | 0.8 |
| Rmerge | 0.058 | 0.031 | 1.292 |
| CC half | 0.999 | 0.999 | 0.307 |
| Anomalous completeness | 97.8 | 99.8 | 79.6 |
| Anomalous multiplicity | 3.7 | 3.7 | 3.7 |
| Cell | 67.47 | 110.49 | 120.03 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/310/122MA_2_1_9.###
Images:
1 - 500
Beam:
(112.36, 112.04) -> (112.36, 112.79)
Distance:
150.0 -> 150.58
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.48 | 4.02 | 1.48 |
| Low resolution limit | 81.37 | 81.49 | 1.51 |
| Completeness | 99.9 | 100.0 | 97.9 |
| Multiplicity | 7.9 | 7.9 | 4.8 |
| I/sigma | 9.9 | 53.8 | 1.3 |
| Rmerge | 0.077 | 0.037 | 0.726 |
| CC half | 0.994 | 0.995 | 0.311 |
| Anomalous completeness | 99.7 | 100.0 | 95.3 |
| Anomalous multiplicity | 4.1 | 4.1 | 4.1 |
| Cell | 67.483 | 110.624 | 120.107 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
