X-Ray Diffraction data from phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21), source of 3RGG structure

Data DOI: 10.15785/SBGRID/302 | ID: 302

Publication DOI: 10.1021/bi102033a

3RGG Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Kappock Laboratory, Purdue University

Release Date: May 31, 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/302

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/302 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/302 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/302 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/302 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 302 ; shasum -c files.sha'

Storage requirements: 3.4G

Biological Sample:

phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

RIGAKU RAXIS IV

Data Creation Date:

Oct. 21, 2006

Related Datasets:

None


Cite this Dataset

Starks, CM.; Kappock, T. 2016. "X-Ray Diffraction data for: phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21). PDB Code 3RGG", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/302.

Download Citation

Dataset Description

Crystal structure of Treponema denticola PurE, a 5-aminoimidazole ribonucleotide (AIR) carboxylase, bound to AIR

Project Members

Name Additional Roles Affiliation While Working on the Project
Courtney M. StarksData CollectorWashington University in St Louis
T. Joseph KappockDepositor, PIPurdue University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.5418

Sweep:

SWEEP1

Files:

/programs/datagrid/302/2030A###.osc

Images:

1 - 200

Beam:

(144.98, 144.36) -> (144.98, 150.18)

Distance:

-130.4 -> 131.35

Spacegroup:

C 2 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.87 5.08 1.87
Low resolution limit 39.39 39.4 1.9
Completeness 96.7 100.0 32.6
Multiplicity 7.7 7.7 1.4
I/sigma 21.2 67.9 1.8
Rmerge 0.055 0.019 1.175
CC half 0.999 0.999 0.661
Anomalous completeness 94.6 100.0 7.8
Anomalous multiplicity 4.0 4.0 4.0
Cell 84.354 154.916 88.075 90.0 90.0 90.0

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.