X-Ray Diffraction data from phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21), source of 3RG8 structure

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Data DOI: 10.15785/SBGRID/301 | ID: 301

Publication DOI: 10.1021/bi102033a

3RG8 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Kappock Laboratory, Purdue University

Release Date: 8 Jul 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/301

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/301 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/301 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/301 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/301 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 301 ; shasum -c files.sha'

Storage requirements: 2.9G

Biological Sample:

phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

beamline 4.2.2, ALS, Berkeley, CA

Data Creation Date:

9 Sep 2006

Related Datasets:

None


Cite this Dataset

Starks, CM.; Kappock, T. 2016. "X-Ray Diffraction data for: phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21). PDB Code 3RG8", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/301.

Download Citation

Dataset Description

Crystal structure of Treponema denticola PurE, a 5-aminoimidazole ribonucleotide (AIR) carboxylase

Project Members

Name Additional Roles Affiliation While Working on the Project
Courtney M. StarksData CollectorWashington University in St Louis
T. Joseph KappockDepositor, PIPurdue University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3d mosflm_beam_centre=80.17,77.84 /programs/datagrid//301/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3dii mosflm_beam_centre=80.17,77.84 /programs/datagrid//301/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=dials mosflm_beam_centre=80.17,77.84 /programs/datagrid//301/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.