Data DOI: 10.15785/SBGRID/272 | ID: 272
Publication DOI: 10.1371/journal.pone.0067901
4HL6 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Kappock Laboratory, Purdue University
Release Date: May 27, 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/272
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/272 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/272 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/272 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/272 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 272 ; shasum -c files.sha'
Storage requirements: 12G
Biological Sample:
acetyl-CoA:oxalate CoA-transferase YfdE (EC 2.8.3.19)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 21-ID-G, LS-CAT, APS, Chicago, IL
Data Creation Date:
June 27, 2012
Related Datasets:
None
Mullins, EA; Nyffeler, KE.; Sullivan, KL.; Kappock, T. 2016. "X-Ray Diffraction data for: acetyl-CoA:oxalate CoA-transferase YfdE (EC 2.8.3.19). PDB Code 4HL6", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/272.
Structure of YfdE from Escherichia coli
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Elwood A Mullins | Purdue University | |
| Kayleigh E. Nyffeler | Purdue University | |
| Kelly L. Sullivan | Data Collector | Purdue University |
| T. Joseph Kappock | Data Collector, Depositor, PI | Purdue University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97856
Sweep:
SWEEP1
Files:
/programs/datagrid/272/H6YfdE_1.###
Images:
1 - 360
Beam:
(145.81, 155.53) -> (145.81, 155.43)
Distance:
275.0 -> 274.93
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.98 | 5.37 | 1.98 |
| Low resolution limit | 37.47 | 37.47 | 2.01 |
| Completeness | 99.5 | 98.8 | 99.4 |
| Multiplicity | 3.7 | 3.6 | 3.3 |
| I/sigma | 4.9 | 13.9 | 0.5 |
| Rmerge | 0.124 | 0.031 | 2.079 |
| CC half | 0.995 | 0.997 | 0.302 |
| Anomalous completeness | 96.0 | 92.2 | 97.2 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 111.47 | 79.53 | 276.12 | 90.0 | 99.92 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97856
Sweep:
SWEEP1
Files:
/programs/datagrid/272/H6YfdE_1.###
Images:
1 - 360
Beam:
(145.81, 155.53) -> (145.81, 155.53)
Distance:
275.0 -> 274.51
Spacegroup:
P 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.4 | 6.51 | 2.4 |
| Low resolution limit | 279.55 | 281.46 | 2.44 |
| Completeness | 99.9 | 100.0 | 98.9 |
| Multiplicity | 3.8 | 3.7 | 3.7 |
| I/sigma | 1.8 | 6.3 | 2.7 |
| Rmerge | 0.893 | 0.298 | 0.961 |
| CC half | 0.017 | 0.877 | 0.021 |
| Anomalous completeness | 99.9 | 100.0 | 98.8 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 109.321 | 79.539 | 279.546 | 90.0 | 89.929 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
