Data DOI: 10.15785/SBGRID/265 | ID: 265
Publication DOI: 10.1016/j.str.2016.03.002
5IGQ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Blacklow Laboratory, Harvard Medical School
Release Date: 27 May 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/265
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/265 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/265 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/265 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/265 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 265 ; shasum -c files.sha'
Storage requirements: 1.6G
Biological Sample:
WD40 domain of Human E3 Ubiquitin Ligase COP1 (RFWD2) bound to peptide from Trib1
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24 ID D
Data Creation Date:
10 Apr 2014
Related Datasets:
None
Uljon, S; Xu, X; Blacklow, S. 2016. "X-Ray Diffraction data for: WD40 domain of Human E3 Ubiquitin Ligase COP1 (RFWD2) bound to peptide from Trib1. PDB Code 5IGQ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/265.
single wavelength dataset of single crystal
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Sacha Uljon | Data Collector, Depositor | Brigham and Women's Hospital |
| Xiang Xu | HMS | |
| Stephen Blacklow | PI | Harvard Medical School |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97921
Sweep:
SWEEP1
Files:
/programs/datagrid/265/2_08_06_1_###.img
Images:
1 - 90
Beam:
(152.07, 158.67) -> (152.07, 158.76)
Distance:
450.0 -> 453.88
Spacegroup:
P 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.99 | 10.81 | 3.99 |
| Low resolution limit | 58.72 | 58.73 | 4.06 |
| Completeness | 94.8 | 86.2 | 97.5 |
| Multiplicity | 2.0 | 2.0 | 2.0 |
| I/sigma | 5.4 | 15.3 | 0.9 |
| Rmerge | 0.094 | 0.04 | 1.71 |
| CC half | 0.993 | 0.992 | 0.442 |
| Anomalous completeness | 80.3 | 86.5 | 78.0 |
| Anomalous multiplicity | 1.1 | 1.1 | 1.1 |
| Cell | 175.69 | 124.64 | 176.17 | 90.0 | 90.46 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97921
Sweep:
SWEEP1
Files:
/programs/datagrid/265/2_08_06_1_###.img
Images:
1 - 90
Beam:
(152.07, 158.67) -> (152.07, 158.76)
Distance:
450.0 -> 453.32
Spacegroup:
P 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.87 | 10.5 | 3.87 |
| Low resolution limit | 124.89 | 124.96 | 3.94 |
| Completeness | 95.0 | 86.1 | 97.2 |
| Multiplicity | 2.0 | 2.0 | 2.0 |
| I/sigma | 5.0 | 15.3 | 0.9 |
| Rmerge | 0.103 | 0.041 | 1.332 |
| CC half | 0.993 | 0.992 | 0.32 |
| Anomalous completeness | 80.0 | 86.1 | 77.0 |
| Anomalous multiplicity | 1.1 | 1.1 | 1.1 |
| Cell | 175.68 | 124.64 | 176.16 | 90.0 | 90.46 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
