Data DOI: 10.15785/SBGRID/264 | ID: 264
Publication DOI: 10.1016/j.str.2016.03.002
5IGO Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Blacklow Laboratory, Harvard Medical School
Release Date: 27 May 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/264
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/264 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/264 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/264 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/264 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 264 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
WD40 domain of Arabidopsis thaliana E3 Ubiquitin Ligase COP1 in complex with peptide from Trib1
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24 ID C
Data Creation Date:
17 Dec 2015
Related Datasets:
None
Uljon, S; Xu, X; Blacklow, S. 2016. "X-Ray Diffraction data for: WD40 domain of Arabidopsis thaliana E3 Ubiquitin Ligase COP1 in complex with peptide from Trib1. PDB Code 5IGO", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/264.
single wavelength x ray data set of single crystal
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Sacha Uljon | Data Collector, Depositor | Brigham and Women's Hospital |
| Xiang Xu | HMS | |
| Stephen Blacklow | PI | Harvard Medical School |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9793
Sweep:
SWEEP1
Files:
/programs/datagrid/264/scb010_3_a_1_####.cbf
Images:
1 - 900
Beam:
(216.64, 222.44) -> (216.64, 222.58)
Distance:
300.0 -> 299.94
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.36 | 3.69 | 1.36 |
| Low resolution limit | 33.0 | 33.01 | 1.38 |
| Completeness | 86.9 | 98.5 | 39.5 |
| Multiplicity | 3.1 | 3.4 | 1.7 |
| I/sigma | 7.1 | 24.3 | 0.5 |
| Rmerge | 0.06 | 0.027 | 1.387 |
| CC half | 0.998 | 0.998 | 0.344 |
| Anomalous completeness | 73.6 | 90.2 | 17.4 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 78.44 | 87.42 | 94.51 | 90.0 | 92.55 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9793
Sweep:
SWEEP1
Files:
/programs/datagrid/264/scb010_3_a_1_####.cbf
Images:
1 - 900
Beam:
(216.64, 222.44) -> (216.64, 222.57)
Distance:
300.0 -> 299.52
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.36 | 3.69 | 1.36 |
| Low resolution limit | 64.15 | 64.22 | 1.38 |
| Completeness | 86.9 | 98.5 | 39.5 |
| Multiplicity | 3.1 | 3.4 | 1.7 |
| I/sigma | 7.1 | 24.3 | 0.5 |
| Rmerge | 0.06 | 0.027 | 1.391 |
| CC half | 0.997 | 0.998 | 0.346 |
| Anomalous completeness | 73.6 | 90.2 | 17.4 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 78.44 | 87.42 | 94.51 | 90.0 | 92.55 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9793
Sweep:
SWEEP1
Files:
/programs/datagrid/264/scb010_3_a_1_####.cbf
Images:
1 - 900
Beam:
(216.64, 222.44) -> (216.64, 222.56)
Distance:
300.0 -> 299.83
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.25 | 3.39 | 1.25 |
| Low resolution limit | 94.41 | 94.68 | 1.27 |
| Completeness | 71.0 | 99.0 | 2.6 |
| Multiplicity | 3.0 | 3.4 | 1.1 |
| I/sigma | 9.5 | 37.8 | 0.2 |
| Rmerge | 0.068 | 0.036 | 2.629 |
| CC half | 0.996 | 0.997 | -0.138 |
| Anomalous completeness | 58.7 | 95.0 | 0.0 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 78.4 | 87.396 | 94.499 | 90.0 | 92.557 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
