Data DOI: 10.15785/SBGRID/254 | ID: 254
Publication DOI: 10.1016/j.cell.2015.11.022
5EO9 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Ozkan Laboratory, University of Chicago
Release Date: 12 Apr 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/254
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/254 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/254 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/254 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/254 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 254 ; shasum -c files.sha'
Storage requirements: 11G
Biological Sample:
Drosophila Dpr6 D1 bound to DIPalpha D1+D2
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline 11-1, SSRL, SLAC National Accelerator Laboratory, Menlo Park, CA
Data Creation Date:
18 May 2013
Related Datasets:
None
Garcia, K; Ozkan, E. 2016. "X-Ray Diffraction data for: Drosophila Dpr6 D1 bound to DIPalpha D1+D2. PDB Code 5EO9", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/254.
High-resolution native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| K. Christopher Garcia | Stanford University | |
| Engin Ozkan | Data Collector, Depositor, PI | University of Chicago |
HKL2000 beam center parameters should be x beam, y beam = 216.76, 212.26. XDS beam center parameters are in the header.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97945
Sweep:
SWEEP2
Files:
/programs/datagrid/254/C1_2_#####.cbf
Images:
1 - 900
Beam:
(216.63, 212.16) -> (216.63, 211.96)
Distance:
450.0 -> 453.25
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.08 | 5.64 | 2.08 |
| Low resolution limit | 35.37 | 35.37 | 2.12 |
| Completeness | 100.0 | 100.0 | 97.7 |
| Multiplicity | 10.6 | 11.4 | 4.8 |
| I/sigma | 14.6 | 45.0 | 0.7 |
| Rmerge | 0.081 | 0.046 | 1.907 |
| CC half | 0.999 | 0.999 | 0.333 |
| Anomalous completeness | 99.5 | 99.9 | 94.6 |
| Anomalous multiplicity | 5.7 | 5.7 | 5.7 |
| Cell | 130.61 | 49.47 | 54.87 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
