Data DOI: 10.15785/SBGRID/232 | ID: 232
Publication DOI: 10.7554/eLife.12548
5FD9 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Fromme Laboratory, Cornell University
Release Date: 11 Mar 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/232
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/232 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/232 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/232 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/232 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 232 ; shasum -c files.sha'
Storage requirements: 1.8G
Biological Sample:
Snf7 core (ESCRT-III filament)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
CHESS F1
Data Creation Date:
26 Mar 2015
Related Datasets:
None
Emr, SD.; Mao, Y; Tang, S; Fromme, J. 2016. "X-Ray Diffraction data for: Snf7 core (ESCRT-III filament). PDB Code 5FD9", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/232.
Data collected on Snf7 filament crystals after high-pressure freezing.
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Scott D. Emr | Cornell University | |
| Yuxin Mao | Cornell University | |
| Shaogang Tang | Data Collector | Cornell University |
| J. Christopher Fromme | Data Collector, Depositor, PI | Cornell University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9804
Sweep:
SWEEP1
Files:
/programs/datagrid/232/hione_2_###.img
Images:
1 - 210
Beam:
(138.99, 130.94) -> (138.99, 130.5)
Distance:
175.0 -> 175.57
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.43 | 3.87 | 1.43 |
| Low resolution limit | 20.62 | 20.62 | 1.45 |
| Completeness | 92.6 | 93.4 | 61.6 |
| Multiplicity | 4.3 | 4.0 | 3.7 |
| I/sigma | 8.8 | 24.6 | 0.3 |
| Rmerge | 0.062 | 0.044 | 3.303 |
| CC half | 0.997 | 0.993 | 0.152 |
| Anomalous completeness | 87.8 | 88.4 | 50.4 |
| Anomalous multiplicity | 2.3 | 2.3 | 2.3 |
| Cell | 29.9 | 46.24 | 44.61 | 90.0 | 98.5 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9804
Sweep:
SWEEP1
Files:
/programs/datagrid/232/hione_2_###.img
Images:
1 - 210
Beam:
(138.99, 130.94) -> (138.99, 130.49)
Distance:
175.0 -> 175.56
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.44 | 3.91 | 1.44 |
| Low resolution limit | 31.92 | 31.93 | 1.46 |
| Completeness | 93.4 | 93.3 | 65.9 |
| Multiplicity | 4.3 | 4.0 | 3.7 |
| I/sigma | 9.0 | 24.6 | 0.5 |
| Rmerge | 0.062 | 0.043 | 2.838 |
| CC half | 0.996 | 0.992 | 0.131 |
| Anomalous completeness | 88.7 | 88.4 | 53.9 |
| Anomalous multiplicity | 2.3 | 2.3 | 2.3 |
| Cell | 29.9 | 46.24 | 44.61 | 90.0 | 98.5 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
