X-Ray Diffraction data from C. elegans HTP-2 bound to HIM-3 closure motif, source of 4TZS structure

Data DOI: 10.15785/SBGRID/210 | ID: 210

Publication DOI: 10.1016/j.devcel.2014.09.013

4TZS Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: Dec. 18, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/210

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/210 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/210 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/210 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/210 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 210 ; shasum -c files.sha'

Storage requirements: 5.3G

Biological Sample:

C. elegans HTP-2 bound to HIM-3 closure motif

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

SSRL 12-2

Data Creation Date:

July 1, 2013

Related Datasets:

None


Cite this Dataset

Rosenberg, SC; Corbett, KD. 2015. "X-Ray Diffraction data for: C. elegans HTP-2 bound to HIM-3 closure motif. PDB Code 4TZS", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/210.

Download Citation

Dataset Description

Native data for C. elegans HTP-2 bound to HIM-3 closure motif, P212121 form

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorCorbett Lab
Scott C RosenbergData CollectorCorbett Lab
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9795

Sweep:

SWEEP1

Files:

/programs/datagrid/210/mD8_1_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 211.92)

Distance:

400.0 -> 400.03

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.36 6.41 2.36
Low resolution limit 82.7 82.75 2.4
Completeness 98.3 98.5 99.2
Multiplicity 6.2 5.9 6.6
I/sigma 5.2 11.7 1.0
Rmerge 0.108 0.035 1.982
CC half 0.995 0.993 0.492
Anomalous completeness 97.9 98.2 99.2
Anomalous multiplicity 3.3 3.3 3.3
Cell 66.141 82.696 118.712 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9795

Sweep:

SWEEP1

Files:

/programs/datagrid/210/mD8_1_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 211.8)

Distance:

400.0 -> 400.47

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.4 9.21 3.4
Low resolution limit 48.21 48.21 3.46
Completeness 98.3 97.0 99.8
Multiplicity 6.5 5.7 6.6
I/sigma 28.0 49.2 11.7
Rmerge 0.04 0.021 0.125
CC half 0.999 1.0 0.997
Anomalous completeness 97.9 95.2 99.5
Anomalous multiplicity 3.5 3.5 3.5
Cell 66.23 82.67 118.69 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9795

Sweep:

SWEEP1

Files:

/programs/datagrid/210/mD8_1_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 211.8)

Distance:

400.0 -> 399.49

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.44 9.32 3.44
Low resolution limit 48.21 48.21 3.5
Completeness 98.4 97.7 99.5
Multiplicity 6.5 5.8 6.4
I/sigma 28.6 49.5 13.2
Rmerge 0.039 0.022 0.108
CC half 0.999 1.0 0.996
Anomalous completeness 98.1 96.3 99.5
Anomalous multiplicity 3.5 3.5 3.5
Cell 66.23 82.67 118.69 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9795

Sweep:

SWEEP1

Files:

/programs/datagrid/210/mD8_1_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 211.8)

Distance:

400.0 -> 399.82

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.39 6.48 2.39
Low resolution limit 48.21 48.22 2.43
Completeness 98.9 99.7 98.1
Multiplicity 6.5 6.1 6.7
I/sigma 6.6 14.7 1.2
Rmerge 0.08 0.024 1.709
CC half 0.997 0.995 0.792
Anomalous completeness 98.7 99.2 97.8
Anomalous multiplicity 3.5 3.5 3.5
Cell 66.235 82.639 118.711 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.