X-Ray Diffraction data from C. elegans HTP-1 bound to HTP-3 motif-1, source of 4TZQ structure

Data DOI: 10.15785/SBGRID/209 | ID: 209

Publication DOI: 10.1016/j.devcel.2014.09.013

4TZQ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: 18 Dec 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/209

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/209 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/209 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/209 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/209 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 209 ; shasum -c files.sha'

Storage requirements: 3.2G

Biological Sample:

C. elegans HTP-1 bound to HTP-3 motif-1

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

SSRL 7-1

Data Creation Date:

4 Feb 2014

Related Datasets:

None


Cite this Dataset

Corbett, KD; Corbett, KD. 2015. "X-Ray Diffraction data for: C. elegans HTP-1 bound to HTP-3 motif-1. PDB Code 4TZQ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/209.

Download Citation

Dataset Description

Native data for C. elegans HTP-1 bound to HTP-3 motif-1

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorCorbett Lab
Kevin D CorbettData CollectorCorbett Lab
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/209/M_A3_1_#####.img

Images:

1 - 180

Beam:

(157.5, 157.5) -> (157.5, 157.59)

Distance:

350.0 -> 350.43

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.83 4.97 1.83
Low resolution limit 66.3 66.34 1.86
Completeness 75.7 98.9 17.0
Multiplicity 3.1 3.4 2.0
I/sigma 6.7 11.9 0.7
Rmerge 0.121 0.047 1.627
CC half 0.896 0.994 0.216
Anomalous completeness 70.4 97.3 12.4
Anomalous multiplicity 1.7 1.7 1.7
Cell 53.01 66.3 84.058 90.0 105.52 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/209/M_A3_1_#####.img

Images:

1 - 180

Beam:

(157.5, 157.5) -> (157.5, 157.46)

Distance:

350.0 -> 350.87

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.24 6.07 2.24
Low resolution limit 40.67 40.67 2.28
Completeness 93.2 98.7 66.9
Multiplicity 3.5 3.6 2.4
I/sigma 6.1 15.0 1.9
Rmerge 0.119 0.035 1.617
CC half 0.978 0.996 0.56
Anomalous completeness 85.7 94.5 52.1
Anomalous multiplicity 1.9 1.9 1.9
Cell 84.26 66.49 159.1 90.0 105.15 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/209/M_A3_1_#####.img

Images:

1 - 180

Beam:

(157.5, 157.5) -> (157.5, 157.45)

Distance:

350.0 -> 351.74

Spacegroup:

C 2 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.56 6.94 2.56
Low resolution limit 51.24 51.25 2.6
Completeness 98.7 99.2 100.0
Multiplicity 7.2 6.8 7.5
I/sigma 2.0 3.0 1.1
Rmerge 0.396 0.291 0.739
CC half 0.85 0.977 0.839
Anomalous completeness 98.4 98.7 100.0
Anomalous multiplicity 3.8 3.8 3.8
Cell 84.34 307.43 66.52 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/209/M_A3_1_#####.img

Images:

1 - 180

Beam:

(157.5, 157.5) -> (157.5, 157.43)

Distance:

350.0 -> 350.19

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.85 5.02 1.85
Low resolution limit 51.24 51.25 1.88
Completeness 64.8 94.6 10.6
Multiplicity 2.0 2.0 1.9
I/sigma 5.3 8.6 0.5
Rmerge 0.149 0.057 2.843
CC half 0.875 0.99 0.448
Anomalous completeness 52.5 86.2 7.7
Anomalous multiplicity 1.1 1.1 1.1
Cell 53.03 66.312 84.05 90.155 105.54 89.99

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.