X-Ray Diffraction data from C. elegans HTP-1 bound to HIM-3 closure motif, source of 4TZO structure

Data DOI: 10.15785/SBGRID/208 | ID: 208

Publication DOI: 10.1016/j.devcel.2014.09.013

4TZO Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: 18 Dec 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/208

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/208 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/208 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/208 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/208 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 208 ; shasum -c files.sha'

Storage requirements: 1.6G

Biological Sample:

C. elegans HTP-1 bound to HIM-3 closure motif

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 24ID-E

Data Creation Date:

5 Dec 2013

Related Datasets:

None


Cite this Dataset

Rosenberg, SC; Corbett, KD. 2015. "X-Ray Diffraction data for: C. elegans HTP-1 bound to HIM-3 closure motif. PDB Code 4TZO", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/208.

Download Citation

Dataset Description

Native data for C. elegans HTP-1 bound to HIM-3 closure motif

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorCorbett Lab
Scott C RosenbergData CollectorCorbett Lab
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97921

Sweep:

SWEEP1

Files:

/programs/datagrid/208/ucsd14_10_1_###.img

Images:

1 - 90

Beam:

(153.52, 158.89) -> (153.52, 158.96)

Distance:

300.0 -> 297.88

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.1 5.69 2.1
Low resolution limit 32.97 32.97 2.14
Completeness 99.9 98.5 99.9
Multiplicity 3.7 3.4 3.7
I/sigma 2.1 4.0 0.6
Rmerge 0.297 0.172 1.432
CC half 0.949 0.979 0.391
Anomalous completeness 98.1 92.7 98.8
Anomalous multiplicity 2.0 2.0 2.0
Cell 107.8 66.76 82.92 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97921

Sweep:

SWEEP1

Files:

/programs/datagrid/208/ucsd14_10_1_###.img

Images:

1 - 90

Beam:

(153.52, 158.89) -> (153.52, 158.93)

Distance:

300.0 -> 297.4

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.12 5.75 2.12
Low resolution limit 65.65 65.68 2.16
Completeness 99.9 98.3 100.0
Multiplicity 3.7 3.4 3.7
I/sigma 2.1 4.0 0.7
Rmerge 0.293 0.174 1.301
CC half 0.954 0.977 0.432
Anomalous completeness 98.3 93.6 98.7
Anomalous multiplicity 2.0 2.0 2.0
Cell 107.67 66.69 82.83 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97921

Sweep:

SWEEP1

Files:

/programs/datagrid/208/ucsd14_10_1_###.img

Images:

1 - 90

Beam:

(153.52, 158.89) -> (153.52, 158.94)

Distance:

300.0 -> 298.0

Spacegroup:

P 21 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.19 5.95 2.19
Low resolution limit 66.46 66.49 2.23
Completeness 99.9 99.1 98.9
Multiplicity 3.6 3.5 3.4
I/sigma 5.2 11.9 2.5
Rmerge 0.544 0.186 0.566
CC half 0.291 0.957 0.234
Anomalous completeness 98.5 98.2 97.0
Anomalous multiplicity 1.9 1.9 1.9
Cell 66.458 82.58 107.284 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.