X-Ray Diffraction data from C. elegans HTP-2 bound to HIM-3 closure motif, source of 4TZL structure

Data DOI: 10.15785/SBGRID/205 | ID: 205

Publication DOI: 10.1016/j.devcel.2014.09.013

4TZL Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: Dec. 18, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/205

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/205 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/205 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/205 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/205 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 205 ; shasum -c files.sha'

Storage requirements: 5.0G

Biological Sample:

C. elegans HTP-2 bound to HIM-3 closure motif

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ALS 8.2.1

Data Creation Date:

June 11, 2013

Related Datasets:

None


Cite this Dataset

Rosenberg, SC; Corbett, KD. 2015. "X-Ray Diffraction data for: C. elegans HTP-2 bound to HIM-3 closure motif. PDB Code 4TZL", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/205.

Download Citation

Dataset Description

Native data for C. elegans HTP-2 bound to HIM-3 closure motif, P21 form

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorCorbett Lab
Scott C RosenbergData CollectorCorbett Lab
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.98447

Sweep:

SWEEP2

Files:

/programs/datagrid/205/911_6_2_###.img

Images:

1 - 100

Beam:

(150.6, 155.7) -> (150.6, 155.76)

Distance:

300.0 -> 298.81

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.44 6.62 2.44
Low resolution limit 65.59 65.61 2.48
Completeness 100.0 100.0 100.0
Multiplicity 5.0 5.4 3.7
I/sigma 9.5 20.4 1.2
Rmerge 0.103 0.053 1.116
CC half 0.995 0.996 0.503
Anomalous completeness 98.2 100.0 99.1
Anomalous multiplicity 2.6 2.6 2.6
Cell 46.69 65.586 93.503 90.0 90.683 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.98447

Sweep:

SWEEP2

Files:

/programs/datagrid/205/911_6_2_###.img

Images:

1 - 100

Beam:

(150.6, 155.7) -> (150.6, 155.73)

Distance:

300.0 -> 298.81

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.45 6.64 2.45
Low resolution limit 38.09 38.1 2.49
Completeness 99.3 91.2 99.7
Multiplicity 5.3 5.4 3.8
I/sigma 10.0 26.0 1.1
Rmerge 0.084 0.044 1.122
CC half 0.997 0.999 0.415
Anomalous completeness 97.6 88.8 98.6
Anomalous multiplicity 2.8 2.8 2.8
Cell 46.75 65.72 93.75 90.0 90.76 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.98447

Sweep:

SWEEP2

Files:

/programs/datagrid/205/911_6_2_###.img

Images:

1 - 100

Beam:

(150.6, 155.7) -> (150.6, 155.73)

Distance:

300.0 -> 298.19

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.47 6.69 2.47
Low resolution limit 38.09 38.1 2.51
Completeness 99.4 92.1 99.8
Multiplicity 4.4 5.3 3.8
I/sigma 10.8 26.8 1.2
Rmerge 0.07 0.043 1.013
CC half 0.997 0.999 0.479
Anomalous completeness 96.6 88.7 98.8
Anomalous multiplicity 2.3 2.3 2.3
Cell 46.75 65.72 93.75 90.0 90.76 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.98447

Sweep:

SWEEP2

Files:

/programs/datagrid/205/911_6_2_###.img

Images:

1 - 100

Beam:

(150.6, 155.7) -> (150.6, 155.71)

Distance:

300.0 -> 297.87

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.61 7.08 2.61
Low resolution limit 47.15 47.16 2.66
Completeness 99.0 100.0 78.9
Multiplicity 5.4 5.6 3.7
I/sigma 8.1 16.3 1.0
Rmerge 0.092 0.051 0.747
CC half 0.995 0.997 0.8
Anomalous completeness 98.3 100.0 78.5
Anomalous multiplicity 2.8 2.8 2.8
Cell 46.743 65.775 94.306 90.0 90.886 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.