Data DOI: 10.15785/SBGRID/203 | ID: 203
Publication DOI: 10.1128/JB.00982-15
5F51 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Crosson Laboratory, University of Chicago
Release Date: Dec. 15, 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/203
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/203 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/203 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/203 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/203 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 203 ; shasum -c files.sha'
Storage requirements: 3.0G
Biological Sample:
Structure of B. abortus WrbA-related protein A (apo-WrpA)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
21-ID-F
Data Creation Date:
Oct. 7, 2013
Related Datasets:
None
Herrou, J; Crosson, S. 2015. "X-Ray Diffraction data for: Structure of B. abortus WrbA-related protein A (apo-WrpA). PDB Code 5F51", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/203.
Native diffraction dataset of B. abortus WrpA protein
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Julien Herrou | Data Collector | University of Chicago |
| Sean Crosson | Data Collector, Depositor, PI | University of Chicago |
Images processed in xia2 using -3d flag. Data were indexed in P4222 and scaled to 2.53 Angstrom resolution.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/203/JH23.###
Images:
15 - 180
Beam:
(112.37, 111.99) -> (112.37, 112.07)
Distance:
180.0 -> 180.55
Spacegroup:
P 42 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.57 | 6.97 | 2.57 |
| Low resolution limit | 44.22 | 44.23 | 2.61 |
| Completeness | 99.9 | 95.2 | 100.0 |
| Multiplicity | 12.7 | 9.7 | 13.4 |
| I/sigma | 10.3 | 12.0 | 5.2 |
| Rmerge | 0.144 | 0.111 | 0.364 |
| CC half | 0.982 | 0.968 | 0.982 |
| Anomalous completeness | 99.9 | 96.9 | 100.0 |
| Anomalous multiplicity | 7.1 | 7.1 | 7.1 |
| Cell | 61.127 | 61.127 | 128.102 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/203/JH23.###
Images:
15 - 180
Beam:
(112.37, 111.99) -> (112.37, 111.97)
Distance:
180.0 -> 180.79
Spacegroup:
P 42 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.88 | 7.79 | 2.88 |
| Low resolution limit | 35.06 | 35.06 | 2.93 |
| Completeness | 99.9 | 97.5 | 99.0 |
| Multiplicity | 12.3 | 9.9 | 12.9 |
| I/sigma | 29.9 | 40.4 | 9.6 |
| Rmerge | 0.056 | 0.054 | 0.271 |
| CC half | 0.998 | 0.997 | 0.99 |
| Anomalous completeness | 99.7 | 98.9 | 98.8 |
| Anomalous multiplicity | 7.0 | 7.0 | 7.0 |
| Cell | 61.26 | 61.26 | 128.27 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/203/JH23.###
Images:
15 - 180
Beam:
(112.37, 111.99) -> (112.37, 111.97)
Distance:
180.0 -> 180.8
Spacegroup:
P 42 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.1 | 8.4 | 3.1 |
| Low resolution limit | 44.3 | 44.31 | 3.15 |
| Completeness | 99.9 | 97.3 | 100.0 |
| Multiplicity | 12.2 | 9.5 | 13.0 |
| I/sigma | 33.9 | 40.1 | 16.7 |
| Rmerge | 0.054 | 0.055 | 0.137 |
| CC half | 0.998 | 0.997 | 0.997 |
| Anomalous completeness | 99.8 | 98.5 | 100.0 |
| Anomalous multiplicity | 7.0 | 7.0 | 7.0 |
| Cell | 61.26 | 61.26 | 128.28 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/203/JH23.###
Images:
15 - 180
Beam:
(112.37, 111.99) -> (112.37, 112.03)
Distance:
180.0 -> 183.32
Spacegroup:
P 42 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.4 | 6.51 | 2.4 |
| Low resolution limit | 62.44 | 62.46 | 2.44 |
| Completeness | 99.7 | 95.9 | 95.1 |
| Multiplicity | 12.9 | 10.6 | 13.2 |
| I/sigma | 15.7 | 38.0 | 1.0 |
| Rmerge | 0.069 | 0.041 | 2.496 |
| CC half | 0.999 | 0.999 | 0.637 |
| Anomalous completeness | 99.7 | 98.0 | 95.2 |
| Anomalous multiplicity | 7.2 | 7.2 | 7.2 |
| Cell | 62.436 | 62.436 | 131.032 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
