Data DOI: 10.15785/SBGRID/2 | ID: 2
Publication DOI: 10.1016/j.cell.2011.10.020
3TS0 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Sliz Laboratory, Harvard Medical School
Release Date: 10 Apr 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/2
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/2 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/2 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/2 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/2 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 2 ; shasum -c files.sha'
Storage requirements: 1.8G
Biological Sample:
Lin28/let-7f-1 microRNA complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein, RNA
Collection Facility:
NSLS X25
Data Creation Date:
6 Sep 2010
Related Datasets:
None
Nam, Y; Sliz, P. 2015. "X-Ray Diffraction data for: Lin28/let-7f-1 microRNA complex. PDB Code 3TS0", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/2.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Yunsun Nam | Data Collector | Harvard Medical School |
| Piotr Sliz | Depositor, PI | Harvard Medical School |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9795
Sweep:
SWEEP1
Files:
/programs/datagrid/2/yn193_9_###.img
Images:
1 - 102
Beam:
(158.0, 158.0) -> (158.0, 157.54)
Distance:
400.0 -> 400.03
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.45 | 6.64 | 2.45 |
| Low resolution limit | 39.29 | 39.3 | 2.49 |
| Completeness | 100.0 | 99.8 | 100.0 |
| Multiplicity | 7.7 | 7.1 | 4.7 |
| I/sigma | 19.1 | 55.9 | 0.6 |
| Rmerge | 0.06 | 0.021 | 2.343 |
| CC half | 0.999 | 0.999 | 0.364 |
| Anomalous completeness | 99.8 | 99.4 | 98.9 |
| Anomalous multiplicity | 4.1 | 4.1 | 4.1 |
| Cell | 139.87 | 139.87 | 85.55 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9795
Sweep:
SWEEP1
Files:
/programs/datagrid/2/yn193_9_###.img
Images:
1 - 102
Beam:
(158.0, 158.0) -> (158.0, 157.55)
Distance:
400.0 -> 400.2
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.45 | 6.65 | 2.45 |
| Low resolution limit | 64.7 | 64.73 | 2.49 |
| Completeness | 100.0 | 99.7 | 100.0 |
| Multiplicity | 7.7 | 7.0 | 4.7 |
| I/sigma | 19.1 | 55.9 | 0.6 |
| Rmerge | 0.06 | 0.021 | 2.344 |
| CC half | 0.999 | 0.999 | 0.355 |
| Anomalous completeness | 99.8 | 99.3 | 98.9 |
| Anomalous multiplicity | 4.1 | 4.1 | 4.1 |
| Cell | 139.87 | 139.87 | 85.55 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9795
Sweep:
SWEEP1
Files:
/programs/datagrid/2/yn193_9_###.img
Images:
1 - 102
Beam:
(158.0, 158.0) -> (158.0, 157.55)
Distance:
400.0 -> 400.09
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.4 | 6.52 | 2.4 |
| Low resolution limit | 98.94 | 99.03 | 2.44 |
| Completeness | 100.0 | 100.0 | 98.6 |
| Multiplicity | 7.6 | 7.3 | 4.2 |
| I/sigma | 15.6 | 65.1 | 0.2 |
| Rmerge | 0.07 | 0.03 | 4.372 |
| CC half | 0.996 | 0.989 | 0.259 |
| Anomalous completeness | 99.9 | 100.0 | 98.0 |
| Anomalous multiplicity | 4.0 | 4.0 | 4.0 |
| Cell | 139.929 | 139.929 | 85.574 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
