X-Ray Diffraction data from the complex of human Atg101-Atg13 HORMA domain, source of 5C50 structure

Data DOI: 10.15785/SBGRID/199 | ID: 199

Publication DOI: 10.1016/j.str.2015.07.011

5C50 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Hurley Laboratory, University of California, Berkeley

Release Date: Dec. 4, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/199

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/199 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/199 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/199 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/199 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 199 ; shasum -c files.sha'

Storage requirements: 6.8G

Biological Sample:

the complex of human Atg101-Atg13 HORMA domain

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ALS BL831

Data Creation Date:

April 18, 2015

Related Datasets:

200


Cite this Dataset

Qi, S; Hurley, J. 2015. "X-Ray Diffraction data for: the complex of human Atg101-Atg13 HORMA domain. PDB Code 5C50", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/199.

Download Citation

Dataset Description

NaBr soaked dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Shiqian QiData Collector, DepositorUC Berkeley
James HurleyPIUniversity of California, Berkeley

Reprocessing Instructions

This dataset was processed with HKL2000 to 1.96 angstrom.

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.92

Sweep:

SWEEP2

Files:

/programs/datagrid/199/Br_1_###.img

Images:

541 - 731

Beam:

(155.64, 156.48) -> (155.64, 156.54)

Distance:

280.0 -> 279.88

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.94 5.26 1.94
Low resolution limit 43.25 43.26 1.97
Completeness 99.8 99.2 99.7
Multiplicity 7.8 7.7 6.7
I/sigma 17.1 52.4 1.6
Rmerge 0.073 0.026 1.078
CC half 0.999 0.999 0.635
Anomalous completeness 99.7 98.8 99.2
Anomalous multiplicity 4.0 4.0 4.0
Cell 67.64 64.75 93.85 90.0 97.49 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.92

Sweep:

SWEEP2

Files:

/programs/datagrid/199/Br_1_###.img

Images:

541 - 731

Beam:

(155.64, 156.48) -> (155.64, 156.54)

Distance:

280.0 -> 280.4

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.94 5.26 1.94
Low resolution limit 46.58 46.59 1.97
Completeness 99.8 99.2 99.7
Multiplicity 7.9 7.7 8.0
I/sigma 17.1 52.3 1.7
Rmerge 0.074 0.026 1.158
CC half 0.999 0.999 0.708
Anomalous completeness 99.7 98.9 99.7
Anomalous multiplicity 4.0 4.0 4.0
Cell 67.64 64.75 93.85 90.0 97.49 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.92

Sweep:

SWEEP2

Files:

/programs/datagrid/199/Br_1_###.img

Images:

541 - 731

Beam:

(155.64, 156.48) -> (155.64, 156.53)

Distance:

280.0 -> 281.05

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.96 5.31 1.96
Low resolution limit 46.67 46.68 1.99
Completeness 99.6 100.0 92.3
Multiplicity 7.9 7.9 6.6
I/sigma 12.9 33.0 1.4
Rmerge 0.084 0.028 1.006
CC half 0.999 0.999 0.786
Anomalous completeness 99.6 100.0 92.0
Anomalous multiplicity 4.1 4.1 4.1
Cell 67.78 64.868 93.896 90.0 97.5 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.