Data DOI: 10.15785/SBGRID/194 | ID: 194
Publication DOI: 10.1371/journal.ppat.1005227
5CXF Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Heldwein Laboratory, Tufts University School of Medicine
Release Date: 13 Nov 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/194
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/194 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/194 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/194 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/194 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 194 ; shasum -c files.sha'
Storage requirements: 2.2G
Biological Sample:
The extracellular domain of glycoprotein B from Human Cytomegalovirus
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
24-ID-E, NE-CAT, APS, Chicago, IL
Data Creation Date:
15 Nov 2014
Related Datasets:
None
Burke, HG; Heldwein, EE. 2015. "X-Ray Diffraction data for: The extracellular domain of glycoprotein B from Human Cytomegalovirus. PDB Code 5CXF", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/194.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Ekaterina E Heldwein | Depositor | Tufts University |
| Heidi G Burke | Data Collector | Tufts University |
| Ekaterina E Heldwein | PI | Tufts University School of Medicine |
For best statistics, process only first 100 frames.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97921
Sweep:
SWEEP1
Files:
/programs/datagrid/194/T7ME294b_1_###.img
Images:
1 - 120
Beam:
(150.91, 158.67) -> (150.91, 158.69)
Distance:
450.0 -> 450.28
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.38 | 9.16 | 3.38 |
| Low resolution limit | 54.12 | 54.13 | 3.44 |
| Completeness | 99.6 | 97.2 | 99.9 |
| Multiplicity | 4.9 | 4.5 | 5.0 |
| I/sigma | 7.0 | 30.3 | 0.7 |
| Rmerge | 0.209 | 0.03 | 2.785 |
| CC half | 0.995 | 0.999 | 0.276 |
| Anomalous completeness | 97.5 | 93.8 | 99.1 |
| Anomalous multiplicity | 2.6 | 2.6 | 2.6 |
| Cell | 134.17 | 295.74 | 92.2 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97921
Sweep:
SWEEP1
Files:
/programs/datagrid/194/T7ME294b_1_###.img
Images:
1 - 120
Beam:
(150.91, 158.67) -> (150.91, 158.69)
Distance:
450.0 -> 450.71
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.38 | 9.17 | 3.38 |
| Low resolution limit | 99.35 | 99.4 | 3.44 |
| Completeness | 99.5 | 96.7 | 99.9 |
| Multiplicity | 4.9 | 4.5 | 5.0 |
| I/sigma | 7.0 | 30.3 | 0.7 |
| Rmerge | 0.209 | 0.03 | 2.78 |
| CC half | 0.995 | 0.999 | 0.28 |
| Anomalous completeness | 97.5 | 93.6 | 99.1 |
| Anomalous multiplicity | 2.6 | 2.6 | 2.6 |
| Cell | 134.16 | 295.69 | 92.18 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97921
Sweep:
SWEEP1
Files:
/programs/datagrid/194/T7ME294b_1_###.img
Images:
1 - 120
Beam:
(150.91, 158.67) -> (150.91, 158.67)
Distance:
450.0 -> 453.15
Spacegroup:
P 2 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.27 | 8.86 | 3.27 |
| Low resolution limit | 296.85 | 298.09 | 3.32 |
| Completeness | 99.6 | 98.0 | 98.7 |
| Multiplicity | 5.0 | 4.6 | 5.0 |
| I/sigma | 6.3 | 48.8 | 0.4 |
| Rmerge | 0.23 | 0.04 | 3.046 |
| CC half | 0.982 | 0.976 | 0.382 |
| Anomalous completeness | 98.7 | 97.8 | 98.1 |
| Anomalous multiplicity | 2.6 | 2.6 | 2.6 |
| Cell | 92.608 | 134.718 | 296.852 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
