Data DOI: 10.15785/SBGRID/191 | ID: 191
Publication DOI: 10.1038/ncomms9143
5C69 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McLellan Laboratory, University of Texas at Austin
Release Date: Oct. 30, 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/191
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/191 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/191 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/191 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/191 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 191 ; shasum -c files.sha'
Storage requirements: 1.8G
Biological Sample:
Prefusion-stabilized RSV F Ectodomain (PR-DM)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
19-ID, SBC, APS, Chicago, IL
Data Creation Date:
Nov. 11, 2014
Related Datasets:
None
McLellan, JS. 2015. "X-Ray Diffraction data for: Prefusion-stabilized RSV F Ectodomain (PR-DM). PDB Code 5C69", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/191.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Jason S McLellan | Data Collector, Depositor | Geisel School of Medicine at Dartmouth |
| Jason McLellan | PI | University of Texas at Austin |
Beam center, as defined in the image headers, needs to be corrected to X=153.1 Y=162.6 Processing with iMosflm will require "Reverse direction of spindle rotation" to be checked
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97924
Sweep:
SWEEP1
Files:
/programs/datagrid/191/P5P14_CC_X1.####.img
Images:
1 - 100
Beam:
(154.5, 159.98) -> (154.5, 162.45)
Distance:
292.16 -> 291.64
Spacegroup:
P 43 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.18 | 5.91 | 2.18 |
| Low resolution limit | 48.42 | 48.43 | 2.22 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 12.0 | 10.7 | 12.3 |
| I/sigma | 16.2 | 57.5 | 0.9 |
| Rmerge | 0.108 | 0.024 | 2.843 |
| CC half | 0.999 | 1.0 | 0.314 |
| Anomalous completeness | 100.0 | 100.0 | 99.9 |
| Anomalous multiplicity | 6.4 | 6.4 | 6.4 |
| Cell | 167.73 | 167.73 | 167.73 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97924
Sweep:
SWEEP1
Files:
/programs/datagrid/191/P5P14_CC_X1.####.img
Images:
1 - 100
Beam:
(154.5, 159.98) -> (154.5, 162.45)
Distance:
292.16 -> 291.8
Spacegroup:
P 43 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.18 | 5.92 | 2.18 |
| Low resolution limit | 53.04 | 53.06 | 2.22 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 12.0 | 10.7 | 12.3 |
| I/sigma | 16.2 | 57.4 | 0.9 |
| Rmerge | 0.108 | 0.024 | 2.847 |
| CC half | 0.999 | 1.0 | 0.315 |
| Anomalous completeness | 100.0 | 100.0 | 99.9 |
| Anomalous multiplicity | 6.4 | 6.4 | 6.4 |
| Cell | 167.73 | 167.73 | 167.73 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97924
Sweep:
SWEEP1
Files:
/programs/datagrid/191/P5P14_CC_X1.####.img
Images:
1 - 100
Beam:
(154.5, 159.98) -> (154.5, 160.32)
Distance:
292.16 -> 295.65
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.96 | 10.74 | 3.96 |
| Low resolution limit | 76.48 | 76.49 | 4.03 |
| Completeness | 13.8 | 11.6 | 14.2 |
| Multiplicity | 1.0 | 1.2 | 1.0 |
| I/sigma | 0.6 | 0.1 | 0.3 |
| Rmerge | 0.0 | 0.0 | 0.0 |
| CC half | -0.169 | -0.173 | 0.0 |
| Anomalous completeness | 0.1 | 2.1 | 0.0 |
| Anomalous multiplicity | 1.0 | 1.0 | 1.0 |
| Cell | 240.946 | 245.471 | 169.455 | 90.0 | 89.783 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
