X-Ray Diffraction data from HSV-1 NEC, source of 4ZXS structure

Data DOI: 10.15785/SBGRID/189 | ID: 189

Publication DOI: 10.15252/embj.201592359

4ZXS Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Heldwein Laboratory, Tufts University School of Medicine

Release Date: Oct. 30, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/189

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/189 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/189 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/189 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/189 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 189 ; shasum -c files.sha'

Storage requirements: 4.2G

Biological Sample:

HSV-1 NEC

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

NSLS X25

Data Creation Date:

Sept. 21, 2012

Related Datasets:

None


Cite this Dataset

Bigalke, JM; Heldwein, EE. 2015. "X-Ray Diffraction data for: HSV-1 NEC. PDB Code 4ZXS", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/189.

Download Citation

Dataset Description

Native dataset.

Project Members

Name Additional Roles Affiliation While Working on the Project
Janna M BigalkeData Collector, DepositorTufts University School of Medicine
Ekaterina E Heldwein, PITufts University School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.6

Sweep:

SWEEP1

Files:

/programs/datagrid/189/JB26_3_#####.cbf

Images:

1 - 720

Beam:

(226.87, 220.16) -> (226.87, 219.65)

Distance:

350.0 -> 353.54

Spacegroup:

P 6

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.42 6.57 2.42
Low resolution limit 95.66 95.74 2.46
Completeness 93.8 100.0 60.6
Multiplicity 13.9 18.2 3.6
I/sigma 15.7 34.9 1.0
Rmerge 0.114 0.068 1.047
CC half 0.998 0.999 0.364
Anomalous completeness 91.5 99.9 49.7
Anomalous multiplicity 7.1 7.1 7.1
Cell 110.461 110.461 155.966 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.6

Sweep:

SWEEP1

Files:

/programs/datagrid/189/JB26_3_#####.cbf

Images:

1 - 720

Beam:

(226.87, 220.16) -> (226.87, 219.75)

Distance:

350.0 -> 352.56

Spacegroup:

P 6

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.45 6.65 2.45
Low resolution limit 55.29 55.3 2.49
Completeness 96.3 100.0 71.8
Multiplicity 15.6 19.6 4.6
I/sigma 24.2 66.2 0.9
Rmerge 0.082 0.041 1.234
CC half 0.999 0.999 0.415
Anomalous completeness 94.9 99.9 64.5
Anomalous multiplicity 8.0 8.0 8.0
Cell 110.58 110.58 155.91 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.6

Sweep:

SWEEP1

Files:

/programs/datagrid/189/JB26_3_#####.cbf

Images:

1 - 720

Beam:

(226.87, 220.16) -> (226.87, 219.74)

Distance:

350.0 -> 353.59

Spacegroup:

P 6

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.45 6.65 2.45
Low resolution limit 81.6 81.65 2.49
Completeness 96.3 100.0 71.9
Multiplicity 15.6 19.6 4.6
I/sigma 24.2 66.2 1.0
Rmerge 0.082 0.041 1.206
CC half 0.999 1.0 0.429
Anomalous completeness 95.0 99.9 64.6
Anomalous multiplicity 8.0 8.0 8.0
Cell 110.58 110.58 155.92 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.6

Sweep:

SWEEP1

Files:

/programs/datagrid/189/JB26_3_#####.cbf

Images:

1 - 720

Beam:

(226.87, 220.16) -> (226.87, 219.8)

Distance:

350.0 -> 353.64

Spacegroup:

P 6

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.36 6.41 2.36
Low resolution limit 155.84 156.18 2.4
Completeness 91.6 100.0 49.7
Multiplicity 14.2 19.2 2.4
I/sigma 16.7 38.7 0.9
Rmerge 0.098 0.055 0.922
CC half 0.999 0.999 0.38
Anomalous completeness 88.5 99.9 31.2
Anomalous multiplicity 7.3 7.3 7.3
Cell 110.485 110.485 155.837 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.