Data DOI: 10.15785/SBGRID/178 | ID: 178
Publication DOI: 10.1073/pnas.1205151109
4FCC Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Schwartz Laboratory, Massachusetts Institute of Technology
Release Date: Oct. 6, 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/178
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/178 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/178 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/178 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/178 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 178 ; shasum -c files.sha'
Storage requirements: 6.4G
Biological Sample:
Glutamate dehydrogenase from E. coli
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
NE-CAT
Data Creation Date:
March 17, 2010
Related Datasets:
None
Bilokapic, S; Schwartz, TU. 2015. "X-Ray Diffraction data for: Glutamate dehydrogenase from E. coli. PDB Code 4FCC", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/178.
native data
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Thomas U Schwartz | Data Collector, Depositor | MIT |
| Silvija Bilokapic | Data Collector | MIT |
| Thomas Schwartz | PI | Massachusetts Institute of Technology |
beam center for HKL2000: x beam 157.4, y beam 156.2
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/178/EC3/EC3_1_###.img
Images:
1 - 360
Beam:
(157.69, 156.47) -> (157.69, 156.59)
Distance:
300.0 -> 301.21
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.83 | 4.97 | 1.83 |
| Low resolution limit | 75.95 | 76.01 | 1.86 |
| Completeness | 93.3 | 99.7 | 61.6 |
| Multiplicity | 6.8 | 6.9 | 4.7 |
| I/sigma | 6.0 | 10.5 | 1.0 |
| Rmerge | 0.188 | 0.139 | 1.416 |
| CC half | 0.987 | 0.986 | 0.334 |
| Anomalous completeness | 92.6 | 98.8 | 60.0 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 105.189 | 150.116 | 176.087 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/178/EC3/EC3_1_###.img
Images:
1 - 360
Beam:
(157.69, 156.47) -> (157.69, 156.53)
Distance:
300.0 -> 301.32
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.91 | 5.18 | 1.91 |
| Low resolution limit | 52.6 | 52.61 | 1.94 |
| Completeness | 97.3 | 100.0 | 76.6 |
| Multiplicity | 7.1 | 6.9 | 5.3 |
| I/sigma | 6.7 | 12.3 | 1.0 |
| Rmerge | 0.163 | 0.117 | 1.297 |
| CC half | 0.991 | 0.99 | 0.405 |
| Anomalous completeness | 96.8 | 99.7 | 75.2 |
| Anomalous multiplicity | 3.7 | 3.7 | 3.7 |
| Cell | 150.31 | 176.34 | 105.19 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/178/EC3/EC3_1_###.img
Images:
1 - 360
Beam:
(157.69, 156.47) -> (157.69, 156.53)
Distance:
300.0 -> 301.41
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.91 | 5.18 | 1.91 |
| Low resolution limit | 114.39 | 114.6 | 1.94 |
| Completeness | 97.3 | 100.0 | 76.6 |
| Multiplicity | 7.1 | 6.9 | 5.3 |
| I/sigma | 6.7 | 12.3 | 1.0 |
| Rmerge | 0.163 | 0.116 | 1.3 |
| CC half | 0.991 | 0.991 | 0.404 |
| Anomalous completeness | 96.8 | 99.7 | 75.2 |
| Anomalous multiplicity | 3.7 | 3.7 | 3.7 |
| Cell | 150.31 | 176.34 | 105.19 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/178/EC3/EC3_1_###.img
Images:
1 - 360
Beam:
(157.69, 156.47) -> (157.69, 156.51)
Distance:
300.0 -> 301.58
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.88 | 7.82 | 2.88 |
| Low resolution limit | 105.21 | 105.28 | 2.93 |
| Completeness | 82.9 | 99.4 | 0.8 |
| Multiplicity | 5.2 | 5.6 | 1.0 |
| I/sigma | 8.6 | 9.6 | 3.6 |
| Rmerge | 0.137 | 0.122 | 0.0 |
| CC half | 0.976 | 0.985 | 0.0 |
| Anomalous completeness | 72.3 | 98.5 | 0.0 |
| Anomalous multiplicity | 2.9 | 2.9 | 2.9 |
| Cell | 105.213 | 150.333 | 176.413 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
