Data DOI: 10.15785/SBGRID/176 | ID: 176
Publication DOI: 10.1038/nsmb.2998
Schwartz Laboratory, Massachusetts Institute of Technology
Release Date: 25 Sep 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/176
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/176 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/176 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/176 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/176 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 176 ; shasum -c files.sha'
Storage requirements: 8.4G
Biological Sample:
Y-COMPLEX HUB (NUP85-NUP120-NUP145C-SEC13 COMPLEX) FROM M. THERMOPHILA (A.K.A. T. HETEROTHALLICA)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 24-ID-C, NE-CAT, APS, Chicago, IL
Data Creation Date:
21 Feb 2014
Related Datasets:
None
Knockenhauer, KE; Kelley, K; Schwartz, T. 2015. "X-Ray Diffraction data for: Y-COMPLEX HUB (NUP85-NUP120-NUP145C-SEC13 COMPLEX) FROM M. THERMOPHILA (A.K.A. T. HETEROTHALLICA).", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/176.
SeMet dataset, all proteins derivatized
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin E Knockenhauer | Data Collector, Depositor | Graduate Student |
| Kotaro Kelley | Data Collector | Graduate Student |
| Thomas Schwartz | PI | Massachusetts Institute of Technology |
Pilatus 6M-F detector, Space group P1
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9789
Sweep:
SWEEP1
Files:
/programs/datagrid/176/hse_5_10_1_####.cbf
Images:
1 - 1440
Beam:
(216.67, 220.51) -> (216.67, 220.47)
Distance:
750.0 -> 749.2
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.82 | 10.36 | 3.82 |
| Low resolution limit | 90.82 | 90.84 | 3.89 |
| Completeness | 96.0 | 94.2 | 97.3 |
| Multiplicity | 7.3 | 7.4 | 7.3 |
| I/sigma | 5.6 | 31.2 | 0.5 |
| Rmerge | 0.269 | 0.043 | 3.348 |
| CC half | 0.995 | 0.998 | 0.285 |
| Anomalous completeness | 91.1 | 88.8 | 92.9 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 107.49 | 118.93 | 162.93 | 80.38 | 74.34 | 63.21 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9789
Sweep:
SWEEP1
Files:
/programs/datagrid/176/hse_5_10_1_####.cbf
Images:
1 - 1440
Beam:
(216.67, 220.51) -> (216.67, 220.48)
Distance:
750.0 -> 746.61
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.61 | 9.79 | 3.61 |
| Low resolution limit | 156.45 | 156.6 | 3.67 |
| Completeness | 95.5 | 94.2 | 96.8 |
| Multiplicity | 7.4 | 7.5 | 7.4 |
| I/sigma | 5.9 | 47.9 | 0.3 |
| Rmerge | 0.257 | 0.042 | 3.683 |
| CC half | 0.998 | 1.0 | 0.259 |
| Anomalous completeness | 90.5 | 89.1 | 91.3 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 107.329 | 118.638 | 162.672 | 80.457 | 74.379 | 63.221 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.