Data DOI: 10.15785/SBGRID/176 | ID: 176
Publication DOI: 10.1038/nsmb.2998
Schwartz Laboratory, Massachusetts Institute of Technology
Release Date: Sept. 25, 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/176
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/176 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/176 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/176 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/176 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 176 ; shasum -c files.sha'
Storage requirements: 8.4G
Biological Sample:
Y-COMPLEX HUB (NUP85-NUP120-NUP145C-SEC13 COMPLEX) FROM M. THERMOPHILA (A.K.A. T. HETEROTHALLICA)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 24-ID-C, NE-CAT, APS, Chicago, IL
Data Creation Date:
Feb. 21, 2014
Related Datasets:
None
Knockenhauer, KE; Kelley, K; Schwartz, T. 2015. "X-Ray Diffraction data for: Y-COMPLEX HUB (NUP85-NUP120-NUP145C-SEC13 COMPLEX) FROM M. THERMOPHILA (A.K.A. T. HETEROTHALLICA).", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/176.
SeMet dataset, all proteins derivatized
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin E Knockenhauer | Data Collector, Depositor | Graduate Student |
| Kotaro Kelley | Data Collector | Graduate Student |
| Thomas Schwartz | PI | Massachusetts Institute of Technology |
Pilatus 6M-F detector, Space group P1
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9789
Sweep:
SWEEP1
Files:
/programs/datagrid/176/hse_5_10_1_####.cbf
Images:
1 - 1440
Beam:
(216.67, 220.51) -> (216.67, 220.47)
Distance:
750.0 -> 749.18
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 4.95 | 13.43 | 4.95 |
| Low resolution limit | 106.0 | 106.02 | 5.04 |
| Completeness | 95.0 | 93.0 | 93.9 |
| Multiplicity | 7.4 | 7.3 | 7.0 |
| I/sigma | 10.7 | 33.9 | 2.7 |
| Rmerge | 0.126 | 0.04 | 0.645 |
| CC half | 0.997 | 0.999 | 0.887 |
| Anomalous completeness | 90.1 | 87.4 | 87.5 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 107.47 | 118.91 | 162.88 | 80.39 | 74.35 | 63.21 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9789
Sweep:
SWEEP1
Files:
/programs/datagrid/176/hse_5_10_1_####.cbf
Images:
1 - 1440
Beam:
(216.67, 220.51) -> (216.67, 220.48)
Distance:
750.0 -> 746.94
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.9 | 10.57 | 3.9 |
| Low resolution limit | 105.86 | 105.9 | 3.96 |
| Completeness | 93.8 | 94.9 | 89.1 |
| Multiplicity | 7.3 | 7.5 | 7.2 |
| I/sigma | 6.4 | 29.9 | 1.2 |
| Rmerge | 0.223 | 0.041 | 1.709 |
| CC half | 0.998 | 1.0 | 0.601 |
| Anomalous completeness | 87.7 | 89.1 | 83.1 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 107.432 | 118.743 | 162.791 | 80.456 | 74.389 | 63.22 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.