X-Ray Diffraction data from mouse PcdhgC3 EC1-3, source of 4ZI8 structure

Data DOI: 10.15785/SBGRID/174 | ID: 174

Publication DOI: 10.1016/j.str.2015.09.005

4ZI8 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Gaudet Laboratory, Harvard University

Release Date: Oct. 27, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/174

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/174 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/174 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/174 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/174 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 174 ; shasum -c files.sha'

Storage requirements: 3.0G

Biological Sample:

mouse PcdhgC3 EC1-3

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

24-ID-C, NE-CAT, APS, Chicago, IL

Data Creation Date:

Dec. 17, 2013

Related Datasets:

None


Cite this Dataset

Nicoludis, JM; Gaudet, R. 2015. "X-Ray Diffraction data for: mouse PcdhgC3 EC1-3. PDB Code 4ZI8", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/174.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
John M NicoludisData Collector, DepositorGraduate Student
Rachelle GaudetPIHarvard University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9792

Sweep:

SWEEP1

Files:

/programs/datagrid/174/RG001_15_1_####.cbf

Images:

1 - 500

Beam:

(216.67, 220.85) -> (216.67, 220.86)

Distance:

325.0 -> 325.51

Spacegroup:

P 2 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.86 5.05 1.86
Low resolution limit 68.14 68.19 1.89
Completeness 98.0 98.0 97.7
Multiplicity 3.7 3.4 3.7
I/sigma 0.8 2.1 0.1
Rmerge 0.507 0.427 4.831
CC half 0.638 0.604 0.058
Anomalous completeness 94.0 94.3 92.7
Anomalous multiplicity 2.0 2.0 2.0
Cell 44.44 82.72 240.41 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9792

Sweep:

SWEEP1

Files:

/programs/datagrid/174/RG001_15_1_####.cbf

Images:

1 - 500

Beam:

(216.67, 220.85) -> (216.67, 220.86)

Distance:

325.0 -> 325.39

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.83 4.97 1.83
Low resolution limit 82.53 82.61 1.86
Completeness 97.5 98.5 97.9
Multiplicity 3.7 3.5 3.7
I/sigma 7.7 23.0 0.6
Rmerge 0.083 0.035 2.459
CC half 0.997 0.997 0.287
Anomalous completeness 90.6 89.0 93.6
Anomalous multiplicity 2.0 2.0 2.0
Cell 44.31 82.53 238.57 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9792

Sweep:

SWEEP1

Files:

/programs/datagrid/174/RG001_15_1_####.cbf

Images:

1 - 500

Beam:

(216.67, 220.85) -> (216.67, 220.86)

Distance:

325.0 -> 325.6

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.75 4.75 1.75
Low resolution limit 82.48 82.57 1.78
Completeness 97.5 98.6 96.5
Multiplicity 3.7 3.6 3.8
I/sigma 5.4 26.5 0.2
Rmerge 0.096 0.044 2.457
CC half 0.995 0.995 0.305
Anomalous completeness 92.7 92.3 92.5
Anomalous multiplicity 2.0 2.0 2.0
Cell 44.307 82.515 238.591 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.