Data DOI: 10.15785/SBGRID/174 | ID: 174
Publication DOI: 10.1016/j.str.2015.09.005
4ZI8 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Gaudet Laboratory, Harvard University
Release Date: Oct. 27, 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/174
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/174 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/174 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/174 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/174 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 174 ; shasum -c files.sha'
Storage requirements: 3.0G
Biological Sample:
mouse PcdhgC3 EC1-3
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
24-ID-C, NE-CAT, APS, Chicago, IL
Data Creation Date:
Dec. 17, 2013
Related Datasets:
None
Nicoludis, JM; Gaudet, R. 2015. "X-Ray Diffraction data for: mouse PcdhgC3 EC1-3. PDB Code 4ZI8", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/174.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| John M Nicoludis | Data Collector, Depositor | Graduate Student |
| Rachelle Gaudet | PI | Harvard University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/174/RG001_15_1_####.cbf
Images:
1 - 500
Beam:
(216.67, 220.85) -> (216.67, 220.99)
Distance:
325.0 -> 325.3
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.81 | 4.91 | 1.81 |
| Low resolution limit | 82.53 | 82.62 | 1.84 |
| Completeness | 95.3 | 94.7 | 96.5 |
| Multiplicity | 3.4 | 3.4 | 3.4 |
| I/sigma | 6.1 | 15.2 | 1.0 |
| Rmerge | 0.108 | 0.042 | 1.433 |
| CC half | 0.993 | 0.992 | 0.307 |
| Anomalous completeness | 87.5 | 87.1 | 88.7 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 44.33 | 82.532 | 238.067 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/174/RG001_15_1_####.cbf
Images:
1 - 500
Beam:
(216.67, 220.85) -> (216.67, 220.87)
Distance:
325.0 -> 325.33
Spacegroup:
P 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.98 | 5.37 | 1.98 |
| Low resolution limit | 78.52 | 78.58 | 2.01 |
| Completeness | 93.1 | 90.6 | 96.4 |
| Multiplicity | 3.5 | 3.1 | 3.8 |
| I/sigma | 6.8 | 17.9 | 1.1 |
| Rmerge | 0.101 | 0.036 | 1.376 |
| CC half | 0.861 | 0.848 | 0.466 |
| Anomalous completeness | 82.7 | 80.2 | 91.6 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 44.61 | 83.09 | 240.15 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/174/RG001_15_1_####.cbf
Images:
1 - 500
Beam:
(216.67, 220.85) -> (216.67, 220.86)
Distance:
325.0 -> 325.42
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.92 | 5.21 | 1.92 |
| Low resolution limit | 82.53 | 82.61 | 1.95 |
| Completeness | 97.4 | 98.1 | 93.9 |
| Multiplicity | 3.6 | 3.4 | 3.5 |
| I/sigma | 8.7 | 23.1 | 1.4 |
| Rmerge | 0.076 | 0.034 | 0.989 |
| CC half | 0.997 | 0.997 | 0.711 |
| Anomalous completeness | 89.9 | 87.9 | 84.6 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 44.31 | 82.53 | 238.57 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/174/RG001_15_1_####.cbf
Images:
1 - 500
Beam:
(216.67, 220.85) -> (216.67, 220.86)
Distance:
325.0 -> 325.69
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.86 | 5.05 | 1.86 |
| Low resolution limit | 82.55 | 82.63 | 1.89 |
| Completeness | 97.7 | 98.5 | 94.7 |
| Multiplicity | 3.6 | 3.5 | 3.6 |
| I/sigma | 5.7 | 13.7 | 0.9 |
| Rmerge | 0.09 | 0.039 | 1.101 |
| CC half | 0.995 | 0.991 | 0.645 |
| Anomalous completeness | 92.7 | 92.5 | 89.9 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 44.323 | 82.548 | 238.682 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
