Data DOI: 10.15785/SBGRID/174 | ID: 174
Publication DOI: 10.1016/j.str.2015.09.005
4ZI8 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Gaudet Laboratory, Harvard University
Release Date: Oct. 27, 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/174
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/174 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/174 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/174 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/174 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 174 ; shasum -c files.sha'
Storage requirements: 3.0G
Biological Sample:
mouse PcdhgC3 EC1-3
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
24-ID-C, NE-CAT, APS, Chicago, IL
Data Creation Date:
Dec. 17, 2013
Related Datasets:
None
Nicoludis, JM; Gaudet, R. 2015. "X-Ray Diffraction data for: mouse PcdhgC3 EC1-3. PDB Code 4ZI8", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/174.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| John M Nicoludis | Data Collector, Depositor | Graduate Student |
| Rachelle Gaudet | PI | Harvard University |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/174/RG001_15_1_####.cbf
Images:
1 - 500
Beam:
(216.67, 220.85) -> (216.67, 220.86)
Distance:
325.0 -> 325.51
Spacegroup:
P 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.86 | 5.05 | 1.86 |
| Low resolution limit | 68.14 | 68.19 | 1.89 |
| Completeness | 98.0 | 98.0 | 97.7 |
| Multiplicity | 3.7 | 3.4 | 3.7 |
| I/sigma | 0.8 | 2.1 | 0.1 |
| Rmerge | 0.507 | 0.427 | 4.831 |
| CC half | 0.638 | 0.604 | 0.058 |
| Anomalous completeness | 94.0 | 94.3 | 92.7 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 44.44 | 82.72 | 240.41 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/174/RG001_15_1_####.cbf
Images:
1 - 500
Beam:
(216.67, 220.85) -> (216.67, 220.86)
Distance:
325.0 -> 325.39
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.83 | 4.97 | 1.83 |
| Low resolution limit | 82.53 | 82.61 | 1.86 |
| Completeness | 97.5 | 98.5 | 97.9 |
| Multiplicity | 3.7 | 3.5 | 3.7 |
| I/sigma | 7.7 | 23.0 | 0.6 |
| Rmerge | 0.083 | 0.035 | 2.459 |
| CC half | 0.997 | 0.997 | 0.287 |
| Anomalous completeness | 90.6 | 89.0 | 93.6 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 44.31 | 82.53 | 238.57 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/174/RG001_15_1_####.cbf
Images:
1 - 500
Beam:
(216.67, 220.85) -> (216.67, 220.86)
Distance:
325.0 -> 325.6
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.75 | 4.75 | 1.75 |
| Low resolution limit | 82.48 | 82.57 | 1.78 |
| Completeness | 97.5 | 98.6 | 96.5 |
| Multiplicity | 3.7 | 3.6 | 3.8 |
| I/sigma | 5.4 | 26.5 | 0.2 |
| Rmerge | 0.096 | 0.044 | 2.457 |
| CC half | 0.995 | 0.995 | 0.305 |
| Anomalous completeness | 92.7 | 92.3 | 92.5 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 44.307 | 82.515 | 238.591 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
