Data DOI: 10.15785/SBGRID/173 | ID: 173
Publication DOI: 10.1016/j.str.2015.09.005
4ZI9 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Gaudet Laboratory, Harvard University
Release Date: Oct. 27, 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/173
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/173 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/173 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/173 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/173 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 173 ; shasum -c files.sha'
Storage requirements: 3.2G
Biological Sample:
mouse PcdhgA1 EC1-3
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
24-ID-E, NE-CAT, APS, Chicago, IL
Data Creation Date:
July 2, 2011
Related Datasets:
None
Nicoludis, JM; Weihofen, WA; Gaudet, R. 2015. "X-Ray Diffraction data for: mouse PcdhgA1 EC1-3. PDB Code 4ZI9", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/173.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| John M Nicoludis | Depositor | Graduate Student |
| Wilhelm A Weihofen | Data Collector | Post-doc |
| Rachelle Gaudet | PI | Harvard University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97919
Sweep:
SWEEP4
Files:
/programs/datagrid/173/P118-WW-A9RUN_1_###.img
Images:
165 - 180
Beam:
(156.54, 165.7) -> (156.54, 165.81)
Distance:
250.0 -> 248.69
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.82 | 4.94 | 1.82 |
| Low resolution limit | 36.9 | 36.9 | 1.85 |
| Completeness | 98.5 | 98.7 | 85.1 |
| Multiplicity | 3.0 | 3.4 | 2.1 |
| I/sigma | 5.3 | 17.8 | 0.3 |
| Rmerge | 0.096 | 0.033 | 1.709 |
| CC half | 0.996 | 0.997 | 0.297 |
| Anomalous completeness | 72.7 | 90.3 | 43.0 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 67.68 | 63.54 | 107.26 | 90.0 | 99.72 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97919
Sweep:
SWEEP4
Files:
/programs/datagrid/173/P118-WW-A9RUN_1_###.img
Images:
165 - 180
Beam:
(156.54, 165.7) -> (156.54, 165.81)
Distance:
250.0 -> 248.73
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.83 | 4.96 | 1.83 |
| Low resolution limit | 36.89 | 36.9 | 1.86 |
| Completeness | 99.1 | 98.6 | 97.6 |
| Multiplicity | 3.0 | 3.4 | 2.1 |
| I/sigma | 5.4 | 17.7 | 0.4 |
| Rmerge | 0.095 | 0.033 | 1.433 |
| CC half | 0.996 | 0.997 | 0.411 |
| Anomalous completeness | 73.6 | 90.4 | 56.7 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 67.68 | 63.53 | 107.25 | 90.0 | 99.72 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97919
Sweep:
SWEEP4
Files:
/programs/datagrid/173/P118-WW-A9RUN_1_###.img
Images:
165 - 180
Beam:
(156.54, 165.7) -> (156.54, 165.77)
Distance:
250.0 -> 248.4
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.31 | 6.27 | 2.31 |
| Low resolution limit | 105.71 | 105.82 | 2.35 |
| Completeness | 99.9 | 100.0 | 97.9 |
| Multiplicity | 3.5 | 3.5 | 3.4 |
| I/sigma | 10.6 | 27.5 | 8.6 |
| Rmerge | 0.224 | 0.108 | 0.601 |
| CC half | 0.908 | 0.938 | 0.496 |
| Anomalous completeness | 87.6 | 98.1 | 80.5 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 67.633 | 63.572 | 107.254 | 90.0 | 99.733 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
