X-Ray Diffraction data from mouse PcdhgA1 EC1-3, source of 4ZI9 structure

Data DOI: 10.15785/SBGRID/173 | ID: 173

Publication DOI: 10.1016/j.str.2015.09.005

4ZI9 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Gaudet Laboratory, Harvard University

Release Date: Oct. 27, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/173

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/173 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/173 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/173 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/173 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 173 ; shasum -c files.sha'

Storage requirements: 3.2G

Biological Sample:

mouse PcdhgA1 EC1-3

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

24-ID-E, NE-CAT, APS, Chicago, IL

Data Creation Date:

July 2, 2011

Related Datasets:

None


Cite this Dataset

Nicoludis, JM; Weihofen, WA; Gaudet, R. 2015. "X-Ray Diffraction data for: mouse PcdhgA1 EC1-3. PDB Code 4ZI9", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/173.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
John M NicoludisDepositorGraduate Student
Wilhelm A WeihofenData CollectorPost-doc
Rachelle GaudetPIHarvard University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97919

Sweep:

SWEEP4

Files:

/programs/datagrid/173/P118-WW-A9RUN_1_###.img

Images:

165 - 180

Beam:

(156.54, 165.7) -> (156.54, 165.81)

Distance:

250.0 -> 248.68

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.01 5.45 2.01
Low resolution limit 36.89 36.9 2.04
Completeness 94.8 98.6 55.9
Multiplicity 3.0 3.4 1.9
I/sigma 5.0 12.3 1.1
Rmerge 0.075 0.031 0.465
CC half 0.995 0.996 0.816
Anomalous completeness 66.0 91.6 15.5
Anomalous multiplicity 1.8 1.8 1.8
Cell 67.68 63.53 107.25 90.0 99.72 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97919

Sweep:

SWEEP4

Files:

/programs/datagrid/173/P118-WW-A9RUN_1_###.img

Images:

165 - 180

Beam:

(156.54, 165.7) -> (156.54, 165.81)

Distance:

250.0 -> 248.71

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.97 5.34 1.97
Low resolution limit 36.89 36.9 2.0
Completeness 89.8 98.7 56.4
Multiplicity 2.7 3.4 1.9
I/sigma 4.9 12.5 0.9
Rmerge 0.064 0.031 0.583
CC half 0.995 0.996 0.79
Anomalous completeness 59.4 91.6 15.0
Anomalous multiplicity 1.6 1.6 1.6
Cell 67.68 63.53 107.25 90.0 99.72 90.0

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.