Data DOI: 10.15785/SBGRID/163 | ID: 163
Publication DOI: 10.1073/pnas.1317118110
4K9E Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Schlessinger Laboratory, Yale University School of Medicine
Release Date: Oct. 6, 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/163
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/163 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/163 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/163 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/163 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 163 ; shasum -c files.sha'
Storage requirements: 16G
Biological Sample:
human KIT D4D5 in complex with Fab79D
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
X29 NSLS, Brookhaven National Laboratory
Data Creation Date:
March 21, 2013
Related Datasets:
None
Reshetnyak, AV; Schlessinger, J. 2015. "X-Ray Diffraction data for: human KIT D4D5 in complex with Fab79D. PDB Code 4K9E", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/163.
Native data set
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Andrey V Reshetnyak | Data Collector, Depositor | Yale |
| Joseph Schlessinger | PI | Yale University School of Medicine |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.075
Sweep:
SWEEP1
Files:
/programs/datagrid/163/79D_1_12_###.img
Images:
1 - 902
Beam:
(158.1, 156.5) -> (158.1, 156.99)
Distance:
330.0 -> 330.66
Spacegroup:
P 61 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.23 | 6.05 | 2.23 |
| Low resolution limit | 57.33 | 57.35 | 2.27 |
| Completeness | 100.0 | 100.0 | 97.5 |
| Multiplicity | 9.7 | 9.0 | 5.3 |
| I/sigma | 14.1 | 51.9 | 0.6 |
| Rmerge | 0.092 | 0.026 | 2.199 |
| CC half | 0.999 | 1.0 | 0.369 |
| Anomalous completeness | 99.7 | 100.0 | 95.7 |
| Anomalous multiplicity | 5.3 | 5.3 | 5.3 |
| Cell | 94.59 | 94.59 | 321.01 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.075
Sweep:
SWEEP1
Files:
/programs/datagrid/163/79D_1_12_###.img
Images:
1 - 902
Beam:
(158.1, 156.5) -> (158.1, 156.99)
Distance:
330.0 -> 331.47
Spacegroup:
P 61 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.23 | 6.05 | 2.23 |
| Low resolution limit | 57.33 | 57.34 | 2.27 |
| Completeness | 100.0 | 100.0 | 97.5 |
| Multiplicity | 9.7 | 9.0 | 5.3 |
| I/sigma | 14.0 | 51.8 | 0.6 |
| Rmerge | 0.092 | 0.026 | 2.215 |
| CC half | 0.999 | 1.0 | 0.365 |
| Anomalous completeness | 99.7 | 100.0 | 95.7 |
| Anomalous multiplicity | 5.3 | 5.3 | 5.3 |
| Cell | 94.59 | 94.59 | 321.0 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.075
Sweep:
SWEEP1
Files:
/programs/datagrid/163/79D_1_12_###.img
Images:
1 - 902
Beam:
(158.1, 156.5) -> (158.1, 156.97)
Distance:
330.0 -> 331.56
Spacegroup:
P 6 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.18 | 5.92 | 2.18 |
| Low resolution limit | 320.98 | 324.52 | 2.22 |
| Completeness | 99.3 | 100.0 | 90.1 |
| Multiplicity | 9.3 | 9.3 | 4.7 |
| I/sigma | 9.4 | 49.6 | 0.2 |
| Rmerge | 0.103 | 0.034 | 2.461 |
| CC half | 0.996 | 0.99 | 0.321 |
| Anomalous completeness | 99.2 | 100.0 | 89.6 |
| Anomalous multiplicity | 5.1 | 5.1 | 5.1 |
| Cell | 94.627 | 94.627 | 320.985 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
