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X-Ray Diffraction data from S. cerevisiae Hrr25, source of 4XHL structure

Data DOI: 10.15785/SBGRID/154 | ID: 154

Publication DOI: 10.15252/embj.201694082

4XHL Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: Aug. 9, 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/154

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/154 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/154 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/154 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/154 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 154 ; shasum -c files.sha'

Storage requirements: 1.6G

Biological Sample:

S. cerevisiae Hrr25

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 24ID-E

Data Creation Date:

Oct. 15, 2012

Related Datasets:

None


Cite this Dataset

Ye, Q; Corbett, KD. 2016. "X-Ray Diffraction data for: S. cerevisiae Hrr25. PDB Code 4XHL", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/154.

Download Citation

Dataset Description

S. cerevisiae Hrr25 bound to inhibitor CK1-7

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorCorbett Lab
QIaozhen YeData CollectorCorbett Lab
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97919

Sweep:

SWEEP2

Files:

/programs/datagrid/154/139_3_1_###.img

Images:

35 - 90

Beam:

(155.14, 159.11) -> (155.14, 158.87)

Distance:

400.0 -> 397.81

Spacegroup:

P 6 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.84 7.71 2.84
Low resolution limit 74.07 74.09 2.89
Completeness 99.0 96.1 99.5
Multiplicity 9.7 8.9 3.7
I/sigma 13.6 49.2 0.7
Rmerge 0.11 0.033 1.417
CC half 0.999 0.999 0.303
Anomalous completeness 98.4 99.1 84.1
Anomalous multiplicity 5.3 5.3 5.3
Cell 137.46 137.46 94.61 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97919

Sweep:

SWEEP2

Files:

/programs/datagrid/154/139_3_1_###.img

Images:

35 - 90

Beam:

(155.14, 159.11) -> (155.14, 158.88)

Distance:

400.0 -> 398.58

Spacegroup:

P 6 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.84 7.71 2.84
Low resolution limit 119.04 119.14 2.89
Completeness 99.0 96.0 99.5
Multiplicity 9.7 8.9 3.7
I/sigma 13.4 48.0 0.7
Rmerge 0.11 0.034 1.414
CC half 0.999 0.999 0.302
Anomalous completeness 98.4 99.1 84.1
Anomalous multiplicity 5.3 5.3 5.3
Cell 137.45 137.45 94.61 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97919

Sweep:

SWEEP2

Files:

/programs/datagrid/154/139_3_1_###.img

Images:

35 - 90

Beam:

(155.14, 159.11) -> (155.14, 154.29)

Distance:

400.0 -> 396.15

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.87 5.08 1.87
Low resolution limit 118.42 118.65 1.91
Completeness 35.7 56.2 0.1
Multiplicity 1.3 1.6 1.0
I/sigma 0.9 2.3 4.2
Rmerge 0.979 0.702 0.0
CC half 0.018 0.003 0.0
Anomalous completeness 10.4 31.7 0.0
Anomalous multiplicity 1.0 1.0 1.0
Cell 93.761 137.073 136.065 59.749 90.107 90.012

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.