Data DOI: 10.15785/SBGRID/15 | ID: 15
Publication DOI: 10.1016/j.neuron.2007.05.027
2PNN Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Gaudet Laboratory, Harvard University
Release Date: 5 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/15
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/15 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/15 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/15 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/15 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 15 ; shasum -c files.sha'
Storage requirements: 2.9G
Biological Sample:
TRPV1-ARD
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
In-house MicroMax007, osmic mirrors, Raxis-IV++
Data Creation Date:
21 Apr 2006
Related Datasets:
None
Jin, X; Gaudet, R. 2015. "X-Ray Diffraction data for: TRPV1-ARD. PDB Code 2PNN", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/15.
TRPV1-ARD native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Xiangshu Jin | Data Collector | NIBS, China |
| Rachelle Gaudet | Depositor, PI | Harvard University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.5418
Sweep:
SWEEP1
Files:
/programs/datagrid/15/v1n4_041906a####.osc
Images:
1 - 170
Beam:
(149.43, 150.11) -> (149.43, 150.2)
Distance:
-200.0 -> -200.08
Spacegroup:
H 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.26 | 6.12 | 2.26 |
| Low resolution limit | 28.93 | 28.93 | 2.3 |
| Completeness | 99.7 | 100.0 | 96.0 |
| Multiplicity | 9.4 | 9.5 | 5.4 |
| I/sigma | 6.6 | 14.2 | 0.3 |
| Rmerge | 0.189 | 0.119 | 4.641 |
| CC half | 0.994 | 0.994 | 0.201 |
| Anomalous completeness | 99.5 | 99.5 | 94.2 |
| Anomalous multiplicity | 5.0 | 5.0 | 5.0 |
| Cell | 99.36 | 99.36 | 106.74 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.5418
Sweep:
SWEEP1
Files:
/programs/datagrid/15/v1n4_041906a####.osc
Images:
1 - 170
Beam:
(149.43, 150.11) -> (149.43, 150.21)
Distance:
-200.0 -> -199.5
Spacegroup:
H 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.27 | 6.15 | 2.27 |
| Low resolution limit | 33.5 | 33.5 | 2.31 |
| Completeness | 99.8 | 100.0 | 96.8 |
| Multiplicity | 9.5 | 9.4 | 5.4 |
| I/sigma | 6.7 | 14.4 | 0.5 |
| Rmerge | 0.187 | 0.118 | 2.719 |
| CC half | 0.994 | 0.991 | 0.338 |
| Anomalous completeness | 99.7 | 99.2 | 95.4 |
| Anomalous multiplicity | 5.0 | 5.0 | 5.0 |
| Cell | 99.36 | 99.36 | 106.75 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.5418
Sweep:
SWEEP1
Files:
/programs/datagrid/15/v1n4_041906a####.osc
Images:
1 - 170
Beam:
(149.43, 150.11) -> (149.43, 150.2)
Distance:
-200.0 -> -199.88
Spacegroup:
R 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.18 | 5.9 | 2.18 |
| Low resolution limit | 29.06 | 29.06 | 2.22 |
| Completeness | 98.1 | 100.0 | 83.6 |
| Multiplicity | 9.0 | 9.8 | 3.7 |
| I/sigma | 2.2 | 16.4 | 0.0 |
| Rmerge | 0.248 | 0.139 | 4.088 |
| CC half | 0.989 | 0.992 | 0.238 |
| Anomalous completeness | 97.7 | 100.0 | 81.1 |
| Anomalous multiplicity | 4.7 | 4.7 | 4.7 |
| Cell | 99.842 | 99.842 | 107.202 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
