1. If this dataset is locally available, it should be accessable at /programs/datagrid/1303
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/1303 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/1303 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/1303 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/1303 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 1303 ; shasum -c files.sha'
Storage requirements: 69G
Biological Sample:
Diffuse Scattering data from SARS-CoV-2 Mac1, Oct 2025 ALS
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 8.3.1, ALS (Advanced Light Source), Berkeley, CA
Data Creation Date:
15 Oct 2025
Related Datasets:
None
Radial, P; Bassim, V; Fraser, J; Holton, J; Zielinski, K; Wankowicz, S. 2026. "X-Ray Diffraction data for: Diffuse Scattering data from SARS-CoV-2 Mac1, Oct 2025 ALS.", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/1303.
This contains datasets from three Mac1 crystals generated as part of Prism, Astera Institute’s effort to develop reproducible methods for generating high quality, diffuse scattering data. Each crystal has a corresponding background dataset in the subdirectory titled “background”. Similar crystals yielded the structure PDB 7KQO. Thus, no new PDB models were submitted. See README more details about the sample prep and beamtime.
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Prism Radial | Depositor | Astera Institute |
| Violla Bassim | Data Collector | University of California, San Francisco |
| Jamie Fraser | University of California, San Francisco | |
| James Holton | Lawrence Berkeley Lab | |
| Kara Zielinski | Data Collector | University of California, San Francisco |
| Stephanie Wankowicz | PI | Astera Institute |
Only 2800 out of the 7200 frames are included due to radiation damage.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.