Data DOI: 10.15785/SBGRID/124 | ID: 124
Publication DOI: 10.1073/pnas.1405983111
4PKF Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Drennan Laboratory, Massachusetts Institute of Technology
Release Date: 21 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/124
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/124 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/124 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/124 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/124 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 124 ; shasum -c files.sha'
Storage requirements: 6.4G
Biological Sample:
Benzylsuccinate synthase alpha-beta-gamma complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
BCBS (HHMI) 8.2.2, ALS, Berkeley, CA
Data Creation Date:
9 Oct 2010
Related Datasets:
None
Funk, MA; Drennan, CL; Drennan, C. 2015. "X-Ray Diffraction data for: Benzylsuccinate synthase alpha-beta-gamma complex. PDB Code 4PKF", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/124.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Michael A Funk | Data Collector, Depositor | MIT |
| Catherine L Drennan | MIT | |
| Catherine Drennan | PI | Massachusetts Institute of Technology |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/124/maf049-1_native_###.img
Images:
1 - 360
Beam:
(156.5, 152.6) -> (156.5, 152.6)
Distance:
300.0 -> 298.06
Spacegroup:
I 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.64 | 4.45 | 1.64 |
| Low resolution limit | 47.93 | 47.95 | 1.67 |
| Completeness | 78.0 | 99.7 | 30.4 |
| Multiplicity | 12.4 | 13.6 | 3.9 |
| I/sigma | 20.2 | 42.8 | 0.7 |
| Rmerge | 0.073 | 0.046 | 1.371 |
| CC half | 0.999 | 0.999 | 0.264 |
| Anomalous completeness | 76.0 | 99.9 | 20.1 |
| Anomalous multiplicity | 6.5 | 6.5 | 6.5 |
| Cell | 113.25 | 120.2 | 135.78 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/124/maf049-1_native_###.img
Images:
1 - 360
Beam:
(156.5, 152.6) -> (156.5, 152.6)
Distance:
300.0 -> 297.56
Spacegroup:
I 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.64 | 4.45 | 1.64 |
| Low resolution limit | 47.93 | 47.95 | 1.67 |
| Completeness | 78.0 | 99.7 | 30.4 |
| Multiplicity | 12.4 | 13.6 | 3.9 |
| I/sigma | 20.2 | 42.8 | 0.7 |
| Rmerge | 0.073 | 0.046 | 1.375 |
| CC half | 0.999 | 0.999 | 0.27 |
| Anomalous completeness | 76.0 | 99.9 | 20.1 |
| Anomalous multiplicity | 6.5 | 6.5 | 6.5 |
| Cell | 113.25 | 120.2 | 135.78 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/124/maf049-1_native_###.img
Images:
1 - 360
Beam:
(156.5, 152.6) -> (156.5, 152.6)
Distance:
300.0 -> 295.26
Spacegroup:
I 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.78 | 4.84 | 1.78 |
| Low resolution limit | 89.38 | 89.49 | 1.81 |
| Completeness | 89.9 | 100.0 | 52.9 |
| Multiplicity | 13.5 | 14.2 | 7.0 |
| I/sigma | 13.7 | 47.1 | 1.8 |
| Rmerge | 0.094 | 0.048 | 0.629 |
| CC half | 0.981 | 0.999 | 0.233 |
| Anomalous completeness | 89.2 | 100.0 | 50.4 |
| Anomalous multiplicity | 7.0 | 7.0 | 7.0 |
| Cell | 112.526 | 119.398 | 134.806 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
