Data DOI: 10.15785/SBGRID/123 | ID: 123
Publication DOI: 10.1038/nsmb.1837
3M1C Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Heldwein Laboratory, Tufts University School of Medicine
Release Date: May 21, 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/123
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/123 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/123 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/123 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/123 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 123 ; shasum -c files.sha'
Storage requirements: 3.9G
Biological Sample:
HSV-2 gH/gL complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
BNL X25
Data Creation Date:
July 26, 2009
Related Datasets:
Chowdary, TK; Heldwein, EE. 2015. "X-Ray Diffraction data for: HSV-2 gH/gL complex. PDB Code 3M1C", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/123.
This is a selenomethionine single-wavelength anomalous diffraction data set collected at 0.9789 angstrom wavelength
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Tirumala K Chowdary | Data Collector | Tufts University School of Medicine |
| Ekaterina E Heldwein | Depositor, PI | Tufts University School of Medicine |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9789
Sweep:
SWEEP1
Files:
/programs/datagrid/123/TKC201_5_###.img
Images:
1 - 219
Beam:
(158.0, 158.0) -> (158.0, 157.83)
Distance:
500.0 -> 494.7
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.82 | 7.65 | 2.82 |
| Low resolution limit | 88.21 | 88.25 | 2.87 |
| Completeness | 100.0 | 100.0 | 97.4 |
| Multiplicity | 14.9 | 14.7 | 7.4 |
| I/sigma | 11.4 | 31.6 | 1.2 |
| Rmerge | 0.275 | 0.062 | 1.922 |
| CC half | 0.991 | 0.999 | 0.412 |
| Anomalous completeness | 99.8 | 100.0 | 97.8 |
| Anomalous multiplicity | 8.1 | 8.1 | 8.1 |
| Cell | 88.211 | 88.211 | 332.29 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9789
Sweep:
SWEEP1
Files:
/programs/datagrid/123/TKC201_5_###.img
Images:
1 - 219
Beam:
(158.0, 158.0) -> (158.0, 157.8)
Distance:
500.0 -> 494.93
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.83 | 7.68 | 2.83 |
| Low resolution limit | 55.46 | 55.47 | 2.88 |
| Completeness | 100.0 | 100.0 | 98.7 |
| Multiplicity | 15.2 | 14.7 | 7.6 |
| I/sigma | 13.4 | 44.7 | 0.9 |
| Rmerge | 0.222 | 0.043 | 2.196 |
| CC half | 0.997 | 0.999 | 0.366 |
| Anomalous completeness | 99.8 | 100.0 | 98.6 |
| Anomalous multiplicity | 8.3 | 8.3 | 8.3 |
| Cell | 88.31 | 88.31 | 332.78 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9789
Sweep:
SWEEP1
Files:
/programs/datagrid/123/TKC201_5_###.img
Images:
1 - 219
Beam:
(158.0, 158.0) -> (158.0, 157.8)
Distance:
500.0 -> 495.04
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.85 | 7.73 | 2.85 |
| Low resolution limit | 61.37 | 61.39 | 2.9 |
| Completeness | 100.0 | 100.0 | 99.5 |
| Multiplicity | 15.4 | 14.7 | 7.9 |
| I/sigma | 13.6 | 44.8 | 0.9 |
| Rmerge | 0.221 | 0.043 | 2.295 |
| CC half | 0.997 | 0.999 | 0.264 |
| Anomalous completeness | 99.8 | 100.0 | 98.5 |
| Anomalous multiplicity | 8.4 | 8.4 | 8.4 |
| Cell | 88.31 | 88.31 | 332.78 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9789
Sweep:
SWEEP1
Files:
/programs/datagrid/123/TKC201_5_###.img
Images:
1 - 219
Beam:
(158.0, 158.0) -> (158.0, 157.8)
Distance:
500.0 -> 495.49
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.83 | 7.67 | 2.83 |
| Low resolution limit | 62.69 | 62.7 | 2.88 |
| Completeness | 100.0 | 100.0 | 95.9 |
| Multiplicity | 15.0 | 14.9 | 7.3 |
| I/sigma | 10.5 | 29.2 | 0.9 |
| Rmerge | 0.25 | 0.054 | 2.664 |
| CC half | 0.994 | 0.998 | 0.329 |
| Anomalous completeness | 99.7 | 100.0 | 96.2 |
| Anomalous multiplicity | 8.2 | 8.2 | 8.2 |
| Cell | 88.656 | 88.656 | 333.926 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
