X-Ray Diffraction data from Anopheles gambiae thioester-containing protein 1 allele S1, source of 4LNV structure

Data DOI: 10.15785/SBGRID/117 | ID: 117

Publication DOI: 10.1371/journal.ppat.1002958

4LNV Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Baxter Laboratory, Yale University

Release Date: June 5, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/117

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/117 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/117 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/117 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/117 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 117 ; shasum -c files.sha'

Storage requirements: 2.2G

Biological Sample:

Anopheles gambiae thioester-containing protein 1 allele S1

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

NSLS X25C

Data Creation Date:

Aug. 19, 2011

Related Datasets:

None


Cite this Dataset

Baxter, RH. G. 2015. "X-Ray Diffraction data for: Anopheles gambiae thioester-containing protein 1 allele S1. PDB Code 4LNV", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/117.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Richard H. G BaxterData Collector, Depositor, PIYale University

Reprocessing Instructions

Processed with HKL2000, integrate as P4, frames 1-200 scaled as P43 to 3.70 Angstrom resolution.

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.1

Sweep:

SWEEP1

Files:

/programs/datagrid/117/SL110809-24_###.cbf

Images:

1 - 360

Beam:

(224.46, 221.02) -> (224.46, 220.22)

Distance:

550.0 -> 550.72

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.39 9.2 3.39
Low resolution limit 148.06 148.2 3.45
Completeness 100.0 100.0 100.0
Multiplicity 12.2 11.2 12.6
I/sigma 9.7 17.6 1.6
Rmerge 0.133 0.05 2.618
CC half 0.993 0.998 0.511
Anomalous completeness 100.0 99.8 100.0
Anomalous multiplicity 6.4 6.4 6.4
Cell 196.504 196.504 225.19 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.1

Sweep:

SWEEP1

Files:

/programs/datagrid/117/SL110809-24_###.cbf

Images:

1 - 360

Beam:

(224.46, 221.02) -> (224.46, 220.16)

Distance:

550.0 -> 549.78

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.44 9.33 3.44
Low resolution limit 62.86 62.87 3.5
Completeness 100.0 100.0 99.9
Multiplicity 13.1 11.6 13.5
I/sigma 17.6 51.5 1.0
Rmerge 0.096 0.036 3.588
CC half 0.999 0.999 0.486
Anomalous completeness 99.9 99.7 99.6
Anomalous multiplicity 6.9 6.9 6.9
Cell 196.39 196.39 225.34 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.1

Sweep:

SWEEP1

Files:

/programs/datagrid/117/SL110809-24_###.cbf

Images:

1 - 360

Beam:

(224.46, 221.02) -> (224.46, 220.15)

Distance:

550.0 -> 549.02

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 4.27 11.57 4.27
Low resolution limit 70.16 70.17 4.34
Completeness 100.0 100.0 100.0
Multiplicity 12.8 11.0 13.3
I/sigma 29.8 51.8 11.9
Rmerge 0.058 0.035 0.237
CC half 0.999 0.998 0.992
Anomalous completeness 100.0 99.4 100.0
Anomalous multiplicity 6.9 6.9 6.9
Cell 196.39 196.39 225.34 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.1

Sweep:

SWEEP1

Files:

/programs/datagrid/117/SL110809-24_###.cbf

Images:

1 - 360

Beam:

(224.46, 221.02) -> (224.46, 220.16)

Distance:

550.0 -> 550.86

Spacegroup:

P 41 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.38 9.17 3.38
Low resolution limit 98.37 98.41 3.44
Completeness 100.0 100.0 100.0
Multiplicity 12.9 11.8 13.4
I/sigma 12.4 27.9 1.2
Rmerge 0.119 0.043 3.002
CC half 0.998 0.998 0.661
Anomalous completeness 100.0 100.0 99.9
Anomalous multiplicity 6.8 6.8 6.8
Cell 196.735 196.735 225.705 90.0 90.0 90.0
This dataset is part of the SBDB Pilot Reference Collection, and has processed intensities available from that collection.

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.