X-Ray Diffraction data from Erythrocyte binding antigen 140, source of 4GF2 structure

Data DOI: 10.15785/SBGRID/115 | ID: 115

Publication DOI: 10.1074/jbc.M112.409276

4GF2 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Tolia Laboratory, Washington U. School of Medicine

Release Date: May 19, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/115

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/115 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/115 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/115 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/115 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 115 ; shasum -c files.sha'

Storage requirements: 1.5G

Biological Sample:

Erythrocyte binding antigen 140

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ALS 4.2.2

Data Creation Date:

Oct. 7, 2010

Related Datasets:

None


Cite this Dataset

Tolia, NH. 2015. "X-Ray Diffraction data for: Erythrocyte binding antigen 140. PDB Code 4GF2", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/115.

Download Citation

Dataset Description

Crystal structure of Plasmodium falciparum Erythrocyte Binding Antigen 140 (PfEBA-140/BAEBL)

Project Members

Name Additional Roles Affiliation While Working on the Project
Niraj H ToliaData Collector, DepositorWashington University in Saint Louis
Niraj ToliaPIWashington U. School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/115/rii140_3_9_4_###.img

Images:

1 - 180

Beam:

(80.0, 77.51) -> (80.0, 77.5)

Distance:

-150.0 -> -149.95

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.19 5.94 2.19
Low resolution limit 40.87 40.88 2.23
Completeness 99.5 97.8 99.9
Multiplicity 3.7 3.5 3.7
I/sigma 13.0 43.8 0.9
Rmerge 0.049 0.015 1.398
CC half 0.999 0.999 0.345
Anomalous completeness 95.0 88.6 97.0
Anomalous multiplicity 1.9 1.9 1.9
Cell 65.4 76.46 82.32 90.0 96.8 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/115/rii140_3_9_4_###.img

Images:

1 - 180

Beam:

(80.0, 77.51) -> (80.0, 77.51)

Distance:

-150.0 -> -150.03

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.18 5.92 2.18
Low resolution limit 55.84 55.86 2.22
Completeness 99.5 97.7 100.0
Multiplicity 3.7 3.5 3.7
I/sigma 12.8 43.7 0.9
Rmerge 0.05 0.015 1.381
CC half 0.999 0.999 0.303
Anomalous completeness 95.0 88.5 97.0
Anomalous multiplicity 1.9 1.9 1.9
Cell 65.4 76.46 82.32 90.0 96.8 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/115/rii140_3_9_4_###.img

Images:

1 - 180

Beam:

(80.0, 77.51) -> (80.0, 77.47)

Distance:

-150.0 -> -150.02

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.15 5.83 2.15
Low resolution limit 65.01 65.04 2.18
Completeness 99.5 99.8 92.4
Multiplicity 3.7 3.7 3.6
I/sigma 10.3 45.8 0.8
Rmerge 0.099 0.033 1.23
CC half 0.992 0.995 0.021
Anomalous completeness 97.8 99.7 87.1
Anomalous multiplicity 1.9 1.9 1.9
Cell 65.459 76.52 82.244 90.0 96.714 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.