Data DOI: 10.15785/SBGRID/112 | ID: 112
Publication DOI: 10.1038/nature12440
4LCK Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Ferré-D'Amaré Laboratory, National Institutes of Health
Release Date: 19 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/112
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/112 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/112 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/112 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/112 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 112 ; shasum -c files.sha'
Storage requirements: 11G
Biological Sample:
T-box ribozyme-tRNA complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
RNA
Collection Facility:
APS 24-ID-E
Data Creation Date:
2 Aug 2012
Related Datasets:
None
Ferré-D'Amaré, AR. 2015. "X-Ray Diffraction data for: T-box ribozyme-tRNA complex. PDB Code 4LCK", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/112.
Diffraction dataset for T-box ribozyme-tRNA complex
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Adrian R Ferré-D'Amaré | Data Collector, Depositor, PI | National Institutes of Health |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/112/jz833_1_###.img
Images:
1 - 150
Beam:
(155.57, 160.4) -> (155.57, 158.87)
Distance:
500.0 -> 498.18
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.16 | 8.57 | 3.16 |
| Low resolution limit | 54.23 | 54.24 | 3.21 |
| Completeness | 99.5 | 93.4 | 99.9 |
| Multiplicity | 6.0 | 5.4 | 5.3 |
| I/sigma | 13.2 | 41.8 | 0.6 |
| Rmerge | 0.06 | 0.023 | 2.45 |
| CC half | 0.997 | 0.996 | 0.248 |
| Anomalous completeness | 97.9 | 87.0 | 96.9 |
| Anomalous multiplicity | 3.2 | 3.2 | 3.2 |
| Cell | 100.36 | 108.46 | 266.94 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/112/jz833_1_###.img
Images:
1 - 150
Beam:
(155.57, 160.4) -> (155.57, 158.87)
Distance:
500.0 -> 499.97
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.18 | 8.62 | 3.18 |
| Low resolution limit | 56.74 | 56.75 | 3.23 |
| Completeness | 99.5 | 93.3 | 100.0 |
| Multiplicity | 6.0 | 5.4 | 5.4 |
| I/sigma | 13.4 | 42.0 | 0.8 |
| Rmerge | 0.059 | 0.023 | 2.026 |
| CC half | 0.997 | 0.995 | 0.335 |
| Anomalous completeness | 97.9 | 86.7 | 97.6 |
| Anomalous multiplicity | 3.2 | 3.2 | 3.2 |
| Cell | 100.36 | 108.46 | 266.93 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
