Data DOI: 10.15785/SBGRID/1116 | ID: 1116
Publication DOI: https://doi.org/10.1038/nature20571
5E11 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Hekstra Laboratory, Harvard University
Release Date: 9 Jul 2024
1. If this dataset is locally available, it should be accessable at /programs/datagrid/1116
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/1116 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/1116 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/1116 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/1116 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 1116 ; shasum -c files.sha'
Storage requirements: 50G
Biological Sample:
Second PDZ domain of Ligand of Numb protein X 2 (human)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline 14-ID, BioCARS, APS, Lemont, IL
Data Creation Date:
18 Mar 2015
Related Datasets:
None
Hewitt, RA.; Henning, RW.; Ranganathan, R; Socolich, MA.; Srajer, V; White, KIan; Hekstra, DR.. 2024. "X-Ray Diffraction data for: Second PDZ domain of Ligand of Numb protein X 2 (human). PDB Code 5E11", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/1116.
Time-resolved data consisting of four passes of pink still images for PDZ2. Passes C, D, and E are spaced two degrees between adjacent images, with pass F spaced one degree between adjacent images. Start angles are 0, 92, 181, and 361.5 degrees for passes C, D, E, and F respectively. Time points are collected at 0, 50, 100, and 200 nanoseconds per image per pass. Metadata: Detector distance: 200 mm Beam center: (175.76 mm, 154.17 mm) Peak wavelength: 1.04 Angstroms Beam spectral bandwidth: 5.5% (BioCARS) Unit cell: 65.3, 39.45, 39.01, 90, 117.54, 90 Space group: C121 Applied voltage: 6.01 kV
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Rick A. Hewitt | Depositor | Harvard University |
| Robert W. Henning | Data Collector | University of Chicago |
| Rama Ranganathan | Data Collector | University of Chicago |
| Michael A. Socolich | Data Collector | Green Center for Systems Biology, UT Southwestern Medical Center |
| Vukica Srajer | Data Collector | University of Chicago |
| K. Ian White | Data Collector | Green Center for Systems Biology, UT Southwestern Medical Center |
| Doeke R. Hekstra | Data Collector, PI | Harvard University |
none
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
