Data DOI: 10.15785/SBGRID/111 | ID: 111
Publication DOI: 10.1038/nsmb.2865
4TS0 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Ferré-D'Amaré Laboratory, National Institutes of Health
Release Date: 19 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/111
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/111 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/111 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/111 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/111 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 111 ; shasum -c files.sha'
Storage requirements: 6.4G
Biological Sample:
'Spinach' RNA-chromophore complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
RNA
Collection Facility:
ALS 5.0.2
Data Creation Date:
16 Aug 2013
Related Datasets:
None
Ferré-D'Amaré, AR. 2015. "X-Ray Diffraction data for: 'Spinach' RNA-chromophore complex. PDB Code 4TS0", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/111.
Diffraction dataset for 'Spinach' RNA-chromophore complex
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Adrian R Ferré-D'Amaré | Data Collector, Depositor, PI | National Institutes of Health |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54981
Sweep:
SWEEP1
Files:
/programs/datagrid/111/kd467c2a_5_###.img
Images:
1 - 360
Beam:
(153.5, 161.9) -> (153.5, 161.9)
Distance:
250.0 -> 250.52
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.58 | 6.99 | 2.58 |
| Low resolution limit | 38.9 | 38.91 | 2.62 |
| Completeness | 100.0 | 100.0 | 98.4 |
| Multiplicity | 12.7 | 11.7 | 7.2 |
| I/sigma | 28.0 | 74.7 | 0.3 |
| Rmerge | 0.05 | 0.019 | 5.175 |
| CC half | 1.0 | 1.0 | 0.101 |
| Anomalous completeness | 99.2 | 99.5 | 91.1 |
| Anomalous multiplicity | 7.0 | 7.0 | 7.0 |
| Cell | 39.78 | 49.56 | 186.42 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54981
Sweep:
SWEEP1
Files:
/programs/datagrid/111/kd467c2a_5_###.img
Images:
1 - 360
Beam:
(153.5, 161.9) -> (153.5, 161.92)
Distance:
250.0 -> 250.54
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.67 | 7.23 | 2.67 |
| Low resolution limit | 39.78 | 39.78 | 2.72 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 13.2 | 11.7 | 9.2 |
| I/sigma | 30.8 | 75.7 | 0.8 |
| Rmerge | 0.048 | 0.019 | 2.524 |
| CC half | 1.0 | 1.0 | 0.355 |
| Anomalous completeness | 99.9 | 99.5 | 100.0 |
| Anomalous multiplicity | 7.3 | 7.3 | 7.3 |
| Cell | 39.78 | 49.56 | 186.42 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54981
Sweep:
SWEEP1
Files:
/programs/datagrid/111/kd467c2a_5_###.img
Images:
1 - 360
Beam:
(153.5, 161.9) -> (153.5, 161.93)
Distance:
250.0 -> 251.6
Spacegroup:
P 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.61 | 7.08 | 2.61 |
| Low resolution limit | 93.72 | 93.78 | 2.65 |
| Completeness | 99.8 | 100.0 | 97.0 |
| Multiplicity | 12.7 | 12.0 | 7.3 |
| I/sigma | 11.9 | 31.2 | 6.4 |
| Rmerge | 0.277 | 0.052 | 0.206 |
| CC half | 0.988 | 0.999 | 0.165 |
| Anomalous completeness | 99.4 | 100.0 | 90.0 |
| Anomalous multiplicity | 7.0 | 7.0 | 7.0 |
| Cell | 39.997 | 49.818 | 187.441 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
