X-Ray Diffraction data from BRD4, source of 4ZC9 structure

Data DOI: 10.15785/SBGRID/110 | ID: 110

4ZC9 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Dhe-Paganon Laboratory, Dana Farber Cancer Institute

Release Date: May 19, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/110

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/110 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/110 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/110 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/110 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 110 ; shasum -c files.sha'

Storage requirements: 6.2G

Biological Sample:

BRD4

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

APS

Data Creation Date:

Dec. 6, 2014

Related Datasets:

None


Cite this Dataset

Seo, H; Dhe-Paganon, S. 2015. "X-Ray Diffraction data for: BRD4. PDB Code 4ZC9", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/110.

Download Citation

Dataset Description

Structure of BRD4a/DB-2-190

Project Members

Name Additional Roles Affiliation While Working on the Project
Hyuk-Soo SeoData Collector, DepositorDFCI
Sirano Dhe-PaganonDFCI
Sirano Dhe-PaganonPIDana Farber Cancer Institute

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9792

Sweep:

SWEEP2

Files:

/programs/datagrid/110/1413_2_####.cbf

Images:

1 - 900

Beam:

(217.14, 220.88) -> (217.14, 221.01)

Distance:

150.0 -> 150.07

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 0.94 2.55 0.94
Low resolution limit 39.85 39.89 0.96
Completeness 85.1 99.0 23.2
Multiplicity 6.1 7.1 1.9
I/sigma 12.4 27.2 0.7
Rmerge 0.066 0.059 0.93
CC half 0.996 0.994 0.246
Anomalous completeness 80.3 98.2 10.6
Anomalous multiplicity 3.3 3.3 3.3
Cell 37.998 43.03 79.7 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9792

Sweep:

SWEEP2

Files:

/programs/datagrid/110/1413_2_####.cbf

Images:

1 - 900

Beam:

(217.14, 220.88) -> (217.14, 220.87)

Distance:

150.0 -> 149.69

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 0.95 2.58 0.95
Low resolution limit 28.49 28.5 0.97
Completeness 86.1 99.0 33.8
Multiplicity 6.3 6.8 2.7
I/sigma 18.2 42.2 1.1
Rmerge 0.044 0.039 0.848
CC half 0.999 0.997 0.422
Anomalous completeness 82.4 97.7 24.2
Anomalous multiplicity 3.4 3.4 3.4
Cell 38.0 43.04 79.7 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9792

Sweep:

SWEEP2

Files:

/programs/datagrid/110/1413_2_####.cbf

Images:

1 - 900

Beam:

(217.14, 220.88) -> (217.14, 220.87)

Distance:

150.0 -> 149.74

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 0.95 2.58 0.95
Low resolution limit 39.85 39.89 0.97
Completeness 86.0 99.0 33.8
Multiplicity 6.3 6.8 2.7
I/sigma 18.2 42.3 1.1
Rmerge 0.044 0.039 0.848
CC half 0.998 0.997 0.431
Anomalous completeness 82.3 97.6 24.2
Anomalous multiplicity 3.4 3.4 3.4
Cell 38.0 43.04 79.7 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9792

Sweep:

SWEEP2

Files:

/programs/datagrid/110/1413_2_####.cbf

Images:

1 - 900

Beam:

(217.14, 220.88) -> (217.14, 220.87)

Distance:

150.0 -> 149.93

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 0.92 2.51 0.92
Low resolution limit 39.86 39.89 0.94
Completeness 81.9 99.5 7.8
Multiplicity 6.3 7.4 1.3
I/sigma 16.1 31.1 0.7
Rmerge 0.057 0.054 0.764
CC half 0.997 0.995 0.269
Anomalous completeness 77.2 98.6 0.9
Anomalous multiplicity 3.4 3.4 3.4
Cell 38.011 43.042 79.711 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.