Data DOI: 10.15785/SBGRID/110 | ID: 110
4ZC9 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Dhe-Paganon Laboratory, Dana Farber Cancer Institute
Release Date: 19 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/110
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/110 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/110 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/110 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/110 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 110 ; shasum -c files.sha'
Storage requirements: 6.2G
Biological Sample:
BRD4
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
APS
Data Creation Date:
6 Dec 2014
Related Datasets:
None
Seo, H; Dhe-Paganon, S. 2015. "X-Ray Diffraction data for: BRD4. PDB Code 4ZC9", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/110.
Structure of BRD4a/DB-2-190
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Hyuk-Soo Seo | Data Collector, Depositor | DFCI |
| Sirano Dhe-Paganon | DFCI | |
| Sirano Dhe-Paganon | PI | Dana Farber Cancer Institute |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP2
Files:
/programs/datagrid/110/1413_2_####.cbf
Images:
1 - 900
Beam:
(217.14, 220.88) -> (217.14, 220.87)
Distance:
150.0 -> 149.64
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 0.92 | 2.5 | 0.92 |
| Low resolution limit | 28.49 | 28.5 | 0.94 |
| Completeness | 80.1 | 99.5 | 9.2 |
| Multiplicity | 6.3 | 6.9 | 1.3 |
| I/sigma | 18.1 | 42.0 | 0.5 |
| Rmerge | 0.045 | 0.039 | 0.657 |
| CC half | 0.998 | 0.997 | 0.422 |
| Anomalous completeness | 76.0 | 97.7 | 1.2 |
| Anomalous multiplicity | 3.4 | 3.4 | 3.4 |
| Cell | 38.0 | 43.04 | 79.7 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP2
Files:
/programs/datagrid/110/1413_2_####.cbf
Images:
1 - 900
Beam:
(217.14, 220.88) -> (217.14, 220.88)
Distance:
150.0 -> 149.73
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 0.92 | 2.5 | 0.92 |
| Low resolution limit | 39.85 | 39.89 | 0.94 |
| Completeness | 80.1 | 99.5 | 9.2 |
| Multiplicity | 6.3 | 6.9 | 1.3 |
| I/sigma | 18.1 | 41.9 | 0.5 |
| Rmerge | 0.045 | 0.039 | 0.656 |
| CC half | 0.998 | 0.997 | 0.423 |
| Anomalous completeness | 75.9 | 97.7 | 1.2 |
| Anomalous multiplicity | 3.4 | 3.4 | 3.4 |
| Cell | 38.0 | 43.04 | 79.7 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP2
Files:
/programs/datagrid/110/1413_2_####.cbf
Images:
1 - 900
Beam:
(217.14, 220.88) -> (217.14, 220.87)
Distance:
150.0 -> 149.94
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 0.93 | 2.53 | 0.93 |
| Low resolution limit | 39.86 | 39.89 | 0.95 |
| Completeness | 84.6 | 99.7 | 19.3 |
| Multiplicity | 6.5 | 7.4 | 1.7 |
| I/sigma | 12.5 | 53.6 | 0.1 |
| Rmerge | 0.056 | 0.05 | 1.128 |
| CC half | 0.997 | 0.995 | 0.169 |
| Anomalous completeness | 80.6 | 98.8 | 6.2 |
| Anomalous multiplicity | 3.4 | 3.4 | 3.4 |
| Cell | 38.012 | 43.043 | 79.714 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
