Data DOI: 10.15785/SBGRID/1075 | ID: 1075
Publication DOI: https://doi.org/10.1101/2024.01.16.572601
6NSM Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Madden Laboratory, Dartmouth Geisel School of Medicine
Release Date: 26 Jan 2024
1. If this dataset is locally available, it should be accessable at /programs/datagrid/1075
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/1075 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/1075 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/1075 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/1075 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 1075 ; shasum -c files.sha'
Storage requirements: 31G
Biological Sample:
Pseudomonas aeruginosa CifR_C99T-C107T-C181R complexed with 26bp dsDNA operator
Dataset Type:
X-Ray Diffraction
Subject Composition:
DNA, Protein
Collection Facility:
NSLS-II 17-ID-2
Data Creation Date:
5 Jun 2018
Related Datasets:
None
He, S; Madden, D. 2024. "X-Ray Diffraction data for: Pseudomonas aeruginosa CifR_C99T-C107T-C181R complexed with 26bp dsDNA operator. PDB Code 6NSM", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/1075.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Susu He | Data Collector, Depositor | Dartmouth |
| Dean Madden | Dartmouth | |
| Dean R Madden | PI | Dartmouth Geisel School of Medicine |
The ASU should be composed of one CifR dimer complex with dsDNA and one apo CifR monomer which forms a dimer with a symmetry mate, according to a SeMet dataset (6NSR). Only the model of CifR dimer complexed with dsDNA was refined since the electron density of the apo-CifR is too weak for building the model.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
